Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02873 ATGGCAACAACGGAATGTTCTTCAACAGACTTATCTGAATCAAACTCATGCCGCGACGGTGTCGCAGCATCACACCTGAAAATAATCTCTCTTTTCGTCATCTTCATCACAAGCGCAATAGGCATGTCAGCGCCCGTCCTTCTCGCCCGTATTTTCCGGGGAAAACCGTTATACGAAAGAGCATTAGTTTTCATAAAATGTTTCGCGGCAGGCGTTATCCTATCAACATCCTTAGTCCACGTTCTACCTGACGCGTACGCAGCACTCGCTGATTGCCACGTGGCATCACATCATCCATGGAAGGATTTCCCTTTCTCTGGATTAGTCACTCTTATCGGCGTTATCCTCGCTCTATTCGTGGATCTTGTTGCTAGTTCCCATGTTGAACACGCGCAGTACGCGCCTGTGAGTGCGGGTGAGAAAGAATTGGGAGTTGAACTTGGCGgtggcggtggtggtggtgaaggAGATTGTGAAAGAGGTGAAGAATTGATAAAATTGAAACAGAAATTGGTATCGCAAGTTTTAGAGATTGGGATAATATTTCATTCGGTGATAATTGGTGTGACTATGGGTATGTCTCAGAATGTTTGTACTATAAGACCTTTAGTTGCTGCTTTGGCTTTTCATCAGATTTTTGAAGGGATGGGTCTTGGTGGTTGTGTTGCTCAGGCAGGATTTAGCTATGGAACAGTGGTGTACATGTGCTTTATGTTTTCAATAACAACCCCAATGGGGATAATTTTGGGGATGATATTATTCTCATTGACAGGTTATGATGATAGTAACCCAAATGCCTTAATAATAGAAGGGTTACTAGGTTCAATTTCTTCAGGAATTCTAATTTACATGGCTCTTGTTGATCTCATAGCAGCTGATTTCTTTCACAACAAGCTTATCAACTCTGATCCACGTTTGAAAAAGGCTTCTTTTGTTGCCTTAACTATGGGTTCTGCTTCTATGTCTATTCTAGCTCTTTGGGCTTGA 987 0.4134 MATTECSSTDLSESNSCRDGVAASHLKIISLFVIFITSAIGMSAPVLLARIFRGKPLYERALVFIKCFAAGVILSTSLVHVLPDAYAALADCHVASHHPWKDFPFSGLVTLIGVILALFVDLVASSHVEHAQYAPVSAGEKELGVELGGGGGGGEGDCERGEELIKLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFSYGTVVYMCFMFSITTPMGIILGMILFSLTGYDDSNPNALIIEGLLGSISSGILIYMALVDLIAADFFHNKLINSDPRLKKASFVALTMGSASMSILALWA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02873 328 PANTHER ZINC TRANSPORTER 6, CHLOROPLASTIC 6 328 - -
Tsu05g02873 328 PANTHER ZINC/IRON TRANSPORTER 6 328 - -
Tsu05g02873 328 TIGRFAM zip: ZIP zinc/iron transport family 11 328 IPR004698 GO:0005385|GO:0016021|GO:0071577
Tsu05g02873 328 Pfam ZIP Zinc transporter 166 325 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Tsu05g02873 328 Pfam ZIP Zinc transporter 25 130 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02873 Tsu-Chr5 39048957 39051717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02873 13 328 Inorganic Solute Cotransporters AT2G30080 66.163 2.17e-156 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02873 K14709 - gmx:100797310 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02873 05 39048957 39051717 Tsu05g02873 05 39048957 39051717 ECH