Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02869 ATGGCTGAGGCTTTACTACGAGTTGCATTTCAGAATTTGATGCCTCTGCTTCAAACTGAATATTCAACCATTTCTGGAATCAGTTCAAAGGCTCAAAAGCTATCAACCACCTTAGATCTAATCAAGGTTGTTCTGGAAGATGCTGAGAAGAAACAAGTCACAGATCGCTCTATCAAGGTATGGCTACAACAACTCAAAGATGCTGTATATGTGCTTGATGATATCCTTGACGAGTGTTCCATTGAATCCAATAGACTTAAGGGCTCATCCTCTTTCAAACCAAAGAACATCATGTTTCGCCATGACATTGGTAACAAGTTGAAAGATATTACAAGGAGATTTGATGATATTGCAGAACGTAAGAATAAGTTTCTTCTACGAGAGGGTGTTACTGTCAGGGAAAGCTCTAGTGAAGTGGCTGAGTGGCGGCAAACCAGCTCCTTTATTGCTGAACAAAAAGTGTATGGACGAGAAGATGATAAAGAGAATATTGTTGAGTTTCTCCTTACCAAAGCAAGGGACTGCGTCTTCCTTTCCGTCTATCCCATAATTGGCTTGGGCGGTGTTGGAAAAACAACTCTAGCTCAATTGGTCTACAATGATCACAGGGTGAATAGCAATTTTCAGAATAAAATTTGGGTTTGTGTTTCGGAAGCTTTCTCGGTCAAGAGGATTCTATGTTCCATTATAGAATCTATCACAAAAGAGAAGTGTGATGCCTTGGATATAGATGTAATACAAAGAAATGTGCAAGAACTATTGCAAGGTAAAAAATATTTGCTAGTTTTAGACGACGTGTGGAATAAAAATGAAGAATTGGAATCCGGATTGACCCAAGTGAAATGGAACAAGTTGAAATCAGTGTTGTCCAATGGATCCAAAGGTAGTTCTTGTTTAGTTTCCACTCGTGATGAGGTTGTTGCATCAATCATGGGAACATGTCAAGCTCAACATTTGTCTGGTCTCTCTGAAAATGAATGTTGGTTGTTATTCAAACAATATGCATTTGGACATGACGGAGAAGACCAAGTAGAGCTTGTGGAAATAGGCAAGGAGATAGCAAAAAGGTGCAGGGGATTGCCTCTTGCTGCACAAGCATTGGGAGGTGTAATGCGCTCAAGGTGTGGAGAAAAGGAATGGCTTGAAGTTAAAGAGAACAGACTTTGGGATTCATTGAATGACAATGATATCATGCTAGAGTTGAGGTTGAGCTACCTTTATCTAACGCCGACCTTAAAGCAATGTTTCGCCTTTTGTGCTATGTTTCCCAAAGATACAAAAatgtcaaagaaagaattgattcATCTTTGGATGGCTAATGGATTTATTTCATCTAGAGAAAATTTGGAGGTTGAAGATGTTGGTAGCATGATTTGGAATGAACTGTGTCAAAAATCGTTCTTTCAAGACATTGACATGGATGAAGATTCTGGTGAGATTTCTTTCAAGATGCATGATCTTGTCCATGATCTTGCTCAATCATTAATGGGGAAAGAATATAATGAATACTTTCCAACAAACCGTTCTCTTCGGGTTTTATGCACGTCCTCGGTATCATCACTAGGGAGTTTAATTCATTTAAGGTATTTGGAACTCTATAGCCTTGACATAAAAACCTTGCCTGATTCAATTTGTAGCTTACAAAAATTggaaatattgaaaataaatggTTGTGATAAACTGAGTTGTCTTCCAAAACGCTTGGCTTGCTTACAAAATCTTAGACATCTAGTCTTTGAAGATTGGCCTTCGTTCTCTTGCTTGTTTCCAAACATTGGAAAAATATCTTGCCTAAGAACATTAAGTTTATACATTGTTAGTTTAGAGAAAGGTAATAGCTTGGCTGAATTACGTGATCTAAACCTTGGCGGAAAACTGAGTATCAAAGACTTAAATAATGTTGGCAGTTTATCTGAAGCTCGAGAGGCCAATTTGATGTGTAAAAAAGACCTTCAACAATTACGGTTGTCATGGAAAAGAAGTGATGAATTACCTGCTATTAATGCTGAACAACTGCTTGATGTGCTTCAACCTCACTCAAATCTCAAGAGGTTGGAAATATGGTACTATGAAGGATTATTGTTACCAAGTTGGATAAGTATTCTTAGTAATTTAGTTTCTCTTGAACTTTGGAATTGCAACAATTGTGTGCGGCTACCTTCAATTGGTAAACTacaatctctaaaaaaattgagattatGGAAAATGGGTAATATAAAATACTTGGATGATGAATGTCACGATGGTATGGAGGTGAGGATTTTCCCATCTTTAGAGGAACTCATATTACGTTATTTACGAAACATAGAGGGGTTATTGAAAGTGGAAAGAGGGGACATGTTTCCTTGTCTTTCTAAAATGGAAATCGCCCTTTGCCCTAAACTTGTACTTCCTTTTCTTCCATCTCTTAAAGGCCTCGATGTATGGAGTGGATGTAACAATGAGTTACTGTGGTCAATCTCTACCTTCCGCAGTCTTACCCACCTCTACCTTGATGAAGGTGATGAAGGAATAACATCCTTCCCAGAGGGGATGTTCACAGACCTTACTTTTCTTCAATCTCTGCAAATATGGAATTTCCGAAAATTGAAGGAGTTACCAAATGAACCCTTTAACCTAGCTTTGGAGACTCTGGTGATCTCTCACTGTGATGAGCTTGAGTCTTTACCAGAGCAAAATTGGGAAAGTCTACAATCCCTTCGAATTCTACGGATTACTAATTGTAAAGGATTGCGATGCTTGTCGGAGGGTATTCGACACCTCACTTCTCTTGAGAGTCTGACAATTCGTGGATGCCCAACATTAGTGGAACGATGCAAGGAGGGAACAGGGGAGGACTGGGACAAGATAGCACATATTCCTAAATTATACATTATGTGA 2880 0.3799 MAEALLRVAFQNLMPLLQTEYSTISGISSKAQKLSTTLDLIKVVLEDAEKKQVTDRSIKVWLQQLKDAVYVLDDILDECSIESNRLKGSSSFKPKNIMFRHDIGNKLKDITRRFDDIAERKNKFLLREGVTVRESSSEVAEWRQTSSFIAEQKVYGREDDKENIVEFLLTKARDCVFLSVYPIIGLGGVGKTTLAQLVYNDHRVNSNFQNKIWVCVSEAFSVKRILCSIIESITKEKCDALDIDVIQRNVQELLQGKKYLLVLDDVWNKNEELESGLTQVKWNKLKSVLSNGSKGSSCLVSTRDEVVASIMGTCQAQHLSGLSENECWLLFKQYAFGHDGEDQVELVEIGKEIAKRCRGLPLAAQALGGVMRSRCGEKEWLEVKENRLWDSLNDNDIMLELRLSYLYLTPTLKQCFAFCAMFPKDTKMSKKELIHLWMANGFISSRENLEVEDVGSMIWNELCQKSFFQDIDMDEDSGEISFKMHDLVHDLAQSLMGKEYNEYFPTNRSLRVLCTSSVSSLGSLIHLRYLELYSLDIKTLPDSICSLQKLEILKINGCDKLSCLPKRLACLQNLRHLVFEDWPSFSCLFPNIGKISCLRTLSLYIVSLEKGNSLAELRDLNLGGKLSIKDLNNVGSLSEAREANLMCKKDLQQLRLSWKRSDELPAINAEQLLDVLQPHSNLKRLEIWYYEGLLLPSWISILSNLVSLELWNCNNCVRLPSIGKLQSLKKLRLWKMGNIKYLDDECHDGMEVRIFPSLEELILRYLRNIEGLLKVERGDMFPCLSKMEIALCPKLVLPFLPSLKGLDVWSGCNNELLWSISTFRSLTHLYLDEGDEGITSFPEGMFTDLTFLQSLQIWNFRKLKELPNEPFNLALETLVISHCDELESLPEQNWESLQSLRILRITNCKGLRCLSEGIRHLTSLESLTIRGCPTLVERCKEGTGEDWDKIAHIPKLYIM 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02869 959 Gene3D - 405 490 IPR036388 -
Tsu05g02869 959 CDD RX-CC_like 2 119 IPR038005 -
Tsu05g02869 959 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 419 IPR027417 -
Tsu05g02869 959 Gene3D - 321 404 IPR042197 -
Tsu05g02869 959 Pfam Rx N-terminal domain 6 100 IPR041118 -
Tsu05g02869 959 Gene3D Ribonuclease Inhibitor 796 943 IPR032675 -
Tsu05g02869 959 Gene3D - 138 317 IPR027417 -
Tsu05g02869 959 SUPERFAMILY L domain-like 483 790 - -
Tsu05g02869 959 Pfam NB-ARC domain 157 386 IPR002182 GO:0043531
Tsu05g02869 959 Gene3D Ribonuclease Inhibitor 491 795 IPR032675 -
Tsu05g02869 959 Gene3D - 6 122 - -
Tsu05g02869 959 SUPERFAMILY RNI-like 755 936 - -
Tsu05g02869 959 PRINTS Disease resistance protein signature 253 267 - -
Tsu05g02869 959 PRINTS Disease resistance protein signature 180 195 - -
Tsu05g02869 959 PRINTS Disease resistance protein signature 357 371 - -
Tsu05g02869 959 PRINTS Disease resistance protein signature 895 911 - -
Tsu05g02869 959 PANTHER DISEASE RESISTANCE PROTEIN RP 31 866 IPR044974 GO:0006952
Tsu05g02869 959 PANTHER OS05G0414200 PROTEIN 31 866 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02869 Tsu-Chr5 38969046 38972081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02869 183 423 WRKY Transcription Factor Family AT5G45050 25.869 6.43e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02869 - - mtr:MTR_5g071220 1320.06