Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02863 ATGATGGAAAGCTCAAGTGAAGTGGCTGAGTGGCGCCAAACCAGCTCCTTTATTGCTGAACACAAAGTGTACGGTCGAGAAGATGATAAAGAAAAGATTGTCGAGTTTCTTTTAAACCAAGCGTGGGACTCTAACTCCCTTCAAGTCTATCCCATTGTTGGCTTAGGTGGCGTTGGAAAAACAACTCTTGCTCAACTCCTCTACAATGATCGAAGGGTGAGTACCAATTTTGATACAAAGATATGGGTTTGTGTTTCTGAAGTTTTCTCGGTCAAGAGGATTCTATGTTCCATTATAGAATCTATCGAACGTCAGAAGTGTGATGCCTTTGATTTAGTAATACAAAACAAGGTGCAAGAACTATTGCATGGTAAAAGATTTTTGCTAGTTTTAGATGACGTTTGGCACAAAAATGAAGAACTTAAATTCGGATTGAGTCAAGAGAAATGGAATCAGTTGAAATCAGTGTTGTGCAGTGGATCCAAAGGTAGTTCTTGTTTAGTTTCCACCCGTGATGACGTTGTTGCATCAATCATGGGAACATGTCAAGCTCATCATTTGTCTGGTCTCTCTGAAAATGAATGTTGGTTGTTATTCAAACAATATGCATTTGGACATGACAGAGAAGAACAAGTAGAGCTTGTGGAAATAGGCAAGGAGATAGCAAAAAAGTGCGGGGGATTACCTCTTGCTGCACAAGCATTGGGAGGTCTAATGCGCTCAAGGAGTGGAGTAGAAGATTGGCTTGAAATTAAAGAAAGCAGACTATGGGATTCACaaagtgaaaattttattttgtcagcCTTGAGGTTGAGCTACTCTTATTTAACTCCGACCTTGAAGCAATGTTTCACATTTTGTGCTATGTTTCCCAAAGATACTGAAATCTTGAAGGAAGAATTGATTCATCTTTGGATGGCTAATGGATTTATTTTCCCAGAGGCCAATTTGGAAATAGAATATGTTGGCGACATGATTTGGAATGAATTATGCCAAAAATCATTCTTCCAAGACATCAAGATTGATGACTATTCAGGAGACACTACTTTCAAGATGAATAATCTAGTCCATGATCTTGCTCAATCAATTATGGGGCGAGAGTGTATGATTTTGGAGAATACAAACACTAATTTGTCAAGAAATACACATCACATTAGTTTTGACCCTACTAACATGTTGCCACTCAATGAGGATGCCTTAAAGAAAGTTGATTCCTTGCGAACATTGTATCAGTTGAAATTCCCCAATAAATTATTTGGCCTTATCCCAAATAGCCATTCTCTTCGGGTTTTATGCGCGAAGCATTTCCAGTTATCATCACTCAAGAGTTTTATTCATTTAAGATATTTGGAGCTTCATGATCATGATATAGAAATCCTCCCTGACTCAATTTATAGCTTGCAGAAATTGGAAATCTTGAAATTGAAACATTTTTCAGAACTTCGTTGTCTACCAGAACACTTAACTCGCTTGGGGAATCTTAGACATCTTGTAATTGAAGATTGTTATTCATTGTCCCATATGTTCCCTTATGTTGGAAAATTGTCTTCTCTGAGAACATTAAGTGTATATATCGTCGAATTAAAGAGAGGACATAGCTTGGCAGAGTTAAATGATCTAAACCTGGGAGGAAAACTGAGCATTGAAGGCCTCGAAAATGTTGCCAATGTATATGAAGCTCAAGAGGCTAATTTGATGGGTAAAACATGCCTTTCTGAGTTATGCTTGTCATGGAGCAAAAAGGGTGAAACTGAGACACGTGCTACTAGTTATGAGCAAGTACTTGAAATGCTTCAACCTCACTCAAATCTCAAGAGGTTGAAAATATGTGACTATGAGGGATCATGCTTCCCAAGTTGGCTCGGAATTCTCAGTAGTTTAGTTTCTCTTGAACTTCAGTATTGTAAAAGCTGTGCAAGTCTTTCACCAATCGGCAAACTACCATATCTTAAGAAACTCCATTTATTGCATTTGGATGAGGTGCAATACTTGGATGATGAATACGACAATGGTTTGGAGGTGAGGGCTTTCCCATCTTTGGAGGAACTTTCTTTAGAAAAGTTGTTTAACATAGAGAAGTTGCTAAAAGTGGAGAGAGGGGGGATGTTCCCGCGTCTTTCTAATTTGACCTTCCTCGACTGTCCTAAACTTGAGTTGCCATTCCTTCCATCTGTTAAAGACCTCTTTGTAGTTGGATGCAACAATGAGATACTGAGATCAATCTCTGGTTTCTATGGCCTTAATACTCTTTACCTTGGTGCAGGTATTGGTGCAGGTAAAGTAATAACATCTTTCCCAGGGATGTTGAGAAACTTGTCTTATCTTAAAGATCTGACAGTAGCCGACTTTCCAAAATTGAAGGAATTACCAAATGAACCCTTCAATCTAGCTTTGGAGCATTTGCATATCTCATGTTGTGCTGAGCTTGAGTCTTTGCCGGAGCGAATTTGGGAAGGTCTACGATCACTTCGAACAATGGAAATTACTGGGTGTAAAGAATTGAGATCCTTGCCGGAAGGTATTCGACATCTCACTTCACTCGAGGTTCTGACTATTTATGGGTGTCCAGCATTAGAGGGACGACTTATGGAGAGAACAGGCGAGGACTGGGATAAGATAGCGCACATTCCAAAATTAGACATTCGTTAG 2649 0.3888 MMESSSEVAEWRQTSSFIAEHKVYGREDDKEKIVEFLLNQAWDSNSLQVYPIVGLGGVGKTTLAQLLYNDRRVSTNFDTKIWVCVSEVFSVKRILCSIIESIERQKCDAFDLVIQNKVQELLHGKRFLLVLDDVWHKNEELKFGLSQEKWNQLKSVLCSGSKGSSCLVSTRDDVVASIMGTCQAHHLSGLSENECWLLFKQYAFGHDREEQVELVEIGKEIAKKCGGLPLAAQALGGLMRSRSGVEDWLEIKESRLWDSQSENFILSALRLSYSYLTPTLKQCFTFCAMFPKDTEILKEELIHLWMANGFIFPEANLEIEYVGDMIWNELCQKSFFQDIKIDDYSGDTTFKMNNLVHDLAQSIMGRECMILENTNTNLSRNTHHISFDPTNMLPLNEDALKKVDSLRTLYQLKFPNKLFGLIPNSHSLRVLCAKHFQLSSLKSFIHLRYLELHDHDIEILPDSIYSLQKLEILKLKHFSELRCLPEHLTRLGNLRHLVIEDCYSLSHMFPYVGKLSSLRTLSVYIVELKRGHSLAELNDLNLGGKLSIEGLENVANVYEAQEANLMGKTCLSELCLSWSKKGETETRATSYEQVLEMLQPHSNLKRLKICDYEGSCFPSWLGILSSLVSLELQYCKSCASLSPIGKLPYLKKLHLLHLDEVQYLDDEYDNGLEVRAFPSLEELSLEKLFNIEKLLKVERGGMFPRLSNLTFLDCPKLELPFLPSVKDLFVVGCNNEILRSISGFYGLNTLYLGAGIGAGKVITSFPGMLRNLSYLKDLTVADFPKLKELPNEPFNLALEHLHISCCAELESLPERIWEGLRSLRTMEITGCKELRSLPEGIRHLTSLEVLTIYGCPALEGRLMERTGEDWDKIAHIPKLDIR 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02863 882 Gene3D Ribonuclease Inhibitor 393 720 IPR032675 -
Tsu05g02863 882 SUPERFAMILY L domain-like 704 857 - -
Tsu05g02863 882 Gene3D - 7 184 IPR027417 -
Tsu05g02863 882 SUPERFAMILY L domain-like 351 749 - -
Tsu05g02863 882 Gene3D - 189 277 IPR042197 -
Tsu05g02863 882 PRINTS Disease resistance protein signature 225 239 - -
Tsu05g02863 882 PRINTS Disease resistance protein signature 818 834 - -
Tsu05g02863 882 PRINTS Disease resistance protein signature 49 64 - -
Tsu05g02863 882 PRINTS Disease resistance protein signature 121 135 - -
Tsu05g02863 882 PANTHER OS05G0414200 PROTEIN 19 839 - -
Tsu05g02863 882 Gene3D Ribonuclease Inhibitor 721 865 IPR032675 -
Tsu05g02863 882 Gene3D - 279 362 IPR036388 -
Tsu05g02863 882 Pfam NB-ARC domain 26 273 IPR002182 GO:0043531
Tsu05g02863 882 PANTHER DISEASE RESISTANCE PROTEIN RP 19 839 IPR044974 GO:0006952
Tsu05g02863 882 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 287 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02863 Tsu-Chr5 38894222 38897058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02863 52 614 WRKY Transcription Factor Family AT5G45050 23.899 5.79e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02863 - - mtr:MTR_5g071220 1127.46