Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02861 ATGTCTGAAGCCTTACTTGGAGTTGTATTTGACAATTTGCTATCTCTTCTTCAAAATGAATTTTCCACCATTTCTGGAATCAAGTCAAAGGCTGAAAATCTGTCAACCACCTTAGATCTGATCAAGGTTGTTATTGAAGATGCTGAGCAAAAACAAGTCACAAACCACTCTATCAAGGTATGGCTCCAACAACTCAAAGATGCTGTATATGTgcttgatgatatttttgatgAATGTTCCATTCAATCCAATAGACTTAAGGCCCCGTCCTTTTTCAACCCAAAGAACATTGTGTTTCGCCATGCAATTGGCAAAAGGTTGAAAGAAATTACAAGGAGATTCGATCAAATTGCTGAAAGTAAAAACAAGTTTCCTCTACAAGAGGGTCTTAGTGTTAGGGAAACTCCTATTGAAGTGGTTGAATGGCGTCAAACCAGCTCCTTTATTGTTGAACCAAAAGTGTATGGACGAGAAGATGACAAAGAGAATATTGTTAGGTTTCTCCTCGGCCAAGCGAGGGACTTCGACTTCCTTTCCATCTATCCCATATTTGGCTTAGGTGGTGTTGGAAAAACAACTCTTGCTGAATTGGTCTATAATGACCACAGGGTAAGTagcaattttcaaacaaaaatttggGTGTGTGTTTCTGAGGTTTTCTCTATCAAGAGGATTTTTTGTTCCATTATAGAATCTATCACTAGAGAAAAGTTTGATGCCTTGGATTTAGATGTTATTGAAAGAGAAATGCAAGAGCTATTGCATGGTAAAAGATATTTGTTGGTTTTGGATGATATATGGAATAAAAACCAAGGATTGGAATTGGGATTAAGCCAAGACAGATGGAACAAGTTGAAATCTGTGTTGTCTTGTCGTTCTAAAGGTGCTTCGATTTTAGTAACCACTCGTGATAAGGATGTTGCAGAAATCACAGGAACACGTCCAGCTCATCATTTAATTGGTCTCTCTGAAAACGAATGTTGGTTGTTGTTCAAACAATATGAATTTGGACGCGGCAGAGAAGAGCAGGAAGAGCTTGTTGCAATAGGAAAAGAGATAGTAAAGAAGTGTGGGGGATTGCCTCTTGCAGCGCAAGCATTGGGAAGTCTAATGCGATCGAGGAGGGAAGAAAAGGAATGGCTTGAAATTAAAGAGAGTAGGCTTTGGACCTTATCAGATGAGAATTCTATTTTGCCTGCTTTGAGGTTAAGCTACTTTCATTTAACACCAACCTTAAAGcggtgttttgctttttgtgCAATATTTCCCAAAGATATGGAAATCGTAAAGGAAGATTTGATTCATCTTTGGATAGGCAATGGATTTATTTTCTCAAGGGCTAATTTGGATGTAGAGGATGTTGGCAATATGATTTGGAATGAATTGTGCCATAAATCATTCTTCCAAGACATCAAGATTGATGATTATTCAGGAGACACAACTTTCAAGATTCATGATCTAGTCCATGATCTTGCTCAATCAGTTATGGGGCCAGAGTGTATGATTTTGGAGAATACTAACACTACTTTGTCAAGAAGCACACACCATGCTAGTTTTTACTCTAATATTAACTTGTTTTCATTCAATAAGGCCTTCAAAAAAGCAGAATCCTTGCGAACGTTCTATAAGTTAGACTTTTCTAGCCAACAAGGTTATGATTACTTCCCAACAAACCGCTCTCTTCGGGTTCTAAGCATAAGCACTTTCAAGTCATCATCATTTGGGAACTTAATTCATTTAAGGTATTTGGAGCTTCGTGATCTTGATATAGTAACCCTCCCTAACTCAATTTATTGCTTGCACAAATTGGACatcttgaaattgaaattttttcgaAAATTGAGTTTTCTACCAGAACACTTGACTTGCTTACAAAATCTCAGACATCTTGTCATTGAAGACTGTCGTTCTTTATCGCGTGTGTTTCCTTACATTGGAAAATTATCTTGCCTAAGAACATTAAGTGTATACTTTGTTCGACCAGATAAAGGGTATGGCTTGGGAGAGCTACATGATCTAATGCTTGGAGGAAAACTGAGCATCCAAGGCCTGCGAAATGTTGGCAGTTTATCCGAAGCTCGACAGGCTAACTTGATGGGTAAGAAAGACCTCCAAGAATTATGTTTGTCATGGAGGAACGATGGTGAAACTGTGATACCTGCCACTAATGTTGAGCAACTACTTGAAGTGCTTCAACCTCACTCAAATCTCAAGAGGTTGAAAATATTTAACTATGATGGATCATGCTTTCCAAAATGGATTGGATTTCTTAATAATTTAGTTGATCTTCAACTTCGGGATTGCAATAATTGCGTTCTTTCATCACTAGGTAAACTGCCATCACTAAGAAAGCTTGAATTATACAATATGCATAACATAAAGTATGTGGATGATGATGACTATCATGATGGTGTGGAGGTGAGGGCTTTTCCATCCTTGGAAAAACTCTTATTAGTAGGGTTAAAAAAGTTAGAGCGATTGTTGAAAGTGGAAATAAGAGATATGTTCCTTCCTCTTTCTAATTTGACCATCATCGATTGTCCTAAATTTGGGTTCCCATGTCTTCCATCCCTGAAAAACCTCATTGTATTTGGATGTAACATTGAGTTACTGATGTCAATCTCTAGTTTCCGCAGTCTTACCACTCTTCATCTTACTAAGGGTGAAGATGTGACGTCCTTCCCTGAGGGAATGTTACGAAATTTGACTTGTCTTCAAAACTTGAAAATTGCTAATTTCCCAAAATTGAAGAAACTCCCAAATGAACCCTTCAGTCTAACTTTGGAGCATCTGAGTATCTATTCTTGTGGTGAGCTTGAGTCTATACCGGAGCAAACTTGGGAAAGTCTTCGATCTCTTCAATCAATGGATATTGGTTATTGTGGAGGATTGAGATCCTTTCCTGAATCTATTCGACACCTCACTTCACTTGAGTTTCTGAAAATCCGTGGTTGTCCAACATTAAAGGAGCGATGCACGGAAGGATCAGGGGAGGACTGGGACAAGATAGCGCACATTCCAAAATTATATGTTGAATGA 3039 0.3731 MSEALLGVVFDNLLSLLQNEFSTISGIKSKAENLSTTLDLIKVVIEDAEQKQVTNHSIKVWLQQLKDAVYVLDDIFDECSIQSNRLKAPSFFNPKNIVFRHAIGKRLKEITRRFDQIAESKNKFPLQEGLSVRETPIEVVEWRQTSSFIVEPKVYGREDDKENIVRFLLGQARDFDFLSIYPIFGLGGVGKTTLAELVYNDHRVSSNFQTKIWVCVSEVFSIKRIFCSIIESITREKFDALDLDVIEREMQELLHGKRYLLVLDDIWNKNQGLELGLSQDRWNKLKSVLSCRSKGASILVTTRDKDVAEITGTRPAHHLIGLSENECWLLFKQYEFGRGREEQEELVAIGKEIVKKCGGLPLAAQALGSLMRSRREEKEWLEIKESRLWTLSDENSILPALRLSYFHLTPTLKRCFAFCAIFPKDMEIVKEDLIHLWIGNGFIFSRANLDVEDVGNMIWNELCHKSFFQDIKIDDYSGDTTFKIHDLVHDLAQSVMGPECMILENTNTTLSRSTHHASFYSNINLFSFNKAFKKAESLRTFYKLDFSSQQGYDYFPTNRSLRVLSISTFKSSSFGNLIHLRYLELRDLDIVTLPNSIYCLHKLDILKLKFFRKLSFLPEHLTCLQNLRHLVIEDCRSLSRVFPYIGKLSCLRTLSVYFVRPDKGYGLGELHDLMLGGKLSIQGLRNVGSLSEARQANLMGKKDLQELCLSWRNDGETVIPATNVEQLLEVLQPHSNLKRLKIFNYDGSCFPKWIGFLNNLVDLQLRDCNNCVLSSLGKLPSLRKLELYNMHNIKYVDDDDYHDGVEVRAFPSLEKLLLVGLKKLERLLKVEIRDMFLPLSNLTIIDCPKFGFPCLPSLKNLIVFGCNIELLMSISSFRSLTTLHLTKGEDVTSFPEGMLRNLTCLQNLKIANFPKLKKLPNEPFSLTLEHLSIYSCGELESIPEQTWESLRSLQSMDIGYCGGLRSFPESIRHLTSLEFLKIRGCPTLKERCTEGSGEDWDKIAHIPKLYVE 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02861 1012 Gene3D - 411 494 IPR036388 -
Tsu05g02861 1012 Pfam NB-ARC domain 157 404 IPR002182 GO:0043531
Tsu05g02861 1012 CDD RX-CC_like 2 119 IPR038005 -
Tsu05g02861 1012 PRINTS Disease resistance protein signature 180 195 - -
Tsu05g02861 1012 PRINTS Disease resistance protein signature 253 267 - -
Tsu05g02861 1012 PRINTS Disease resistance protein signature 357 371 - -
Tsu05g02861 1012 PRINTS Disease resistance protein signature 948 964 - -
Tsu05g02861 1012 SUPERFAMILY RNI-like 810 987 - -
Tsu05g02861 1012 Gene3D - 6 121 - -
Tsu05g02861 1012 Gene3D Ribonuclease Inhibitor 521 849 IPR032675 -
Tsu05g02861 1012 Gene3D Ribonuclease Inhibitor 852 995 IPR032675 -
Tsu05g02861 1012 SUPERFAMILY L domain-like 483 846 - -
Tsu05g02861 1012 Coils Coil 31 51 - -
Tsu05g02861 1012 Pfam Rx N-terminal domain 6 99 IPR041118 -
Tsu05g02861 1012 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 419 IPR027417 -
Tsu05g02861 1012 PANTHER OS05G0414200 PROTEIN 29 989 - -
Tsu05g02861 1012 PANTHER DISEASE RESISTANCE PROTEIN RP 29 989 IPR044974 GO:0006952
Tsu05g02861 1012 Gene3D - 321 409 IPR042197 -
Tsu05g02861 1012 Gene3D - 141 314 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02861 Tsu-Chr5 38829249 38832287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02861 183 791 WRKY Transcription Factor Family AT5G45050 24.559 2.10e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02861 - - mtr:MTR_5g071220 1327.38