Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02849 atGTCTGATGCTTTACTTGGAGTTGCGTTTGAGAATTTGATGTCTCTGCTTCAAAATGAATTTTCAACAATTTCTGGAATCAGTTCAAAATCTCGAAAGCTATCAACCACCTTAGATCTGATCAAGGCTGTTCTTGAAGATGCTGAGAAGAAGCAACTCACAGATCGCTCTATTAAGGTATGGCTACAACAACTCAATGATGCTGTATATGTACTCGATGATATCCTTGATGAGTGTTCCATTAAATCCAATCGACTTAATGGCTCATCCTCTTTCAAACCAACGAATATCATTTTCCGCCATAACATTGGAAACAGGTTGAAAGAAATTACAAGCAGATTCGATGCAATCGCTGAGAGGAAGAACAAATTTCTTCTACAAGAGGGTGTTACTGCTAAGGAAATGACAGGTGAAGTGGCTGAATGGCGTCAAACCAGCTCAATTATTGCTGAACCCAAAGTGTACGGACGAGAAGAAGATAAAGAGAAGATTGTCGAGTTTCTTCTCAACCAAGCGAGGGACTCTGACTCCCTTTCAGTCTATCCCATTGTTGGCTTAGGTGGTGTTGGAAAAACAACTCTCACTCAATTGGTCTACAATGATCCAAGGGTGAGTAGTGCAAATTTTCATACAAAGATATGGGTTTGTGTTTCTGAAGTCTTCTCGGTCAAGAGGATTCTATGTTCCATTATAGAATCTATCGAATGTCAGAAGTGTGATGCCTTGGATTTAGATGTAATACAAAGAAAGGTGCAAGAACTATTGCATGGTAAAAGATTTTTGCTAGTTTTAGATGACGTTTGGAACAAAAATGAAGAACTGAAATTCGGATTGAGCCAAGAGAAATGGAACCAGTTGAAATCAGTGTTGTCCAGTGGATCCAAAGGTAGTTCTTGTTTAGTTTCCACCCGTGATGAGGTTGTTGCATCAATCATGGGAACATGTCACGCTCATCATTTGTCTGGTCTCTCTGAAAATGAATGTTGGTTGTTATTCAAACAATATGCGTTTGGGCATGACAGAGAAGAACAAGTAGAGCTGGTGGAAATAGGCAAGGAGATAGCAAAAAAGTGCGGGGGGTTGCCTCTTGCTGCACAAGCATTGGGAGGTCTAATGCGCTCAAGGAGTGGAGAAAAAGAATGGCTTGAAATTAAAGAAAGTAGACTTTGGGATTCACAtagtgacaattttattttgccgGCCTTGAGGTTGAGCTACTCTTATTTAACTCCGACTTTAAAACAATGTTTCACTTTTTGTGCTATGTTTCCCAAAGATACTGAAATCTTGAAGGAAGGATTGATTCATCTTTGGATGGCGCATGGATTTATTTCATCTAGAAAAAATTTGGAGGTTGAAGATGTTGGCAGCATGATTTGGAATGAACTGTGCCAAAAATCATTCTTTCAAGACATTAAGACGGATGAAGATTCTGGTGAGATTTCTTTCAAGATGCATGATCTTGTCCATGATCTTGCTCAATTAATAATGGGGCAAGAATGTTTGTATTTGGAGGATGCAAACATGACTAGTTTGTCAAAAAGCACACACCACATAAGTTTTCACTCCAAAAACTTGTTATCAATCAATAAAGGTGCCTTCAAAAAAGTTGAATCCTTGCGAACATTTTTTCAACTGAATCGATTTGGAGAAAAACTTCATTACTTCCCAACAAACCATTTTCTTCGGATTTTATGCACATCTTTTATCCACGTACCATCACTAGGGAGTTTAATTCATTTAAGGTATTTGGAACTTCGTTCCCTTGACATAGAAATGTTGCCTGATTCAATTTGTAGCTTACAAAAATTggaaatattcaaaatcaaacattgtGATAAACTAAGTTGTCTTCCAAAACGCTTGGCTTGCTTACAAAATCTTAGACATCTAGTTATTGATGATTGTCCTTCTCTGTCTTGCTTGTTTCCAAACATTGGAAAATTATCTTTCCTAAGAACATTAAGTTTATACATTGTTAGGTTAGAGAAAGGTAATAGCTTGGCTGAATTACGTGATCTAAACCTCGGCCGAAGACTGAGTATCAAAGGCTTAAATAATGTTGGCAGTTTATCTGAAGCTCAAGAGGCCAATTTGATGGGTAAAAAAGACCTTCAAGTATTAAAGTTGTCATGGAAAATAAGAAGAGATGAATTTACAAACACACCTGCTGTTAATGCTGAACAAGTACTTGAAGTGCTTCAACCTCACTCAAATCTCAAGAGGTTAGATATAAATTACTATGAAGGATTATTGTTACCAAGTTGGATACGTATTCTTAAGAATTTAGTTTCTCTTAAACTTAGTGAATGCAAGAATTGTGTGGGCCTATGGTCAATTGGTAAACTacaatctctaaaaaatttgaCATTATCCGGTATGGATAATATAAAATACTTGGATGATGAATGTCACGATGGTATGGAGGTGAGGATTTTCCCATCTCTGGAGGTACTCAGGTTGAGAAATTTAGCAAACATAGAGTGGTTATTGAAAGTGGAAAGTGGGGACATGTTTCCTTGTCTTTCTTATTTGGAAATCGACGAGTGCCCTAAACTTGTACTTCCTTTTCTTCCATCTCTTAAACAGCTCGATGTCCATGGATGTAACAATGAGTTACTGAGGTCAATCTCTACCTTCTGCAGTCTTACCAGTCTTTTCCTTGGTAGAGGTGATGAAGGAATAACATCCTTCCCAGAGGGGATGTTCACAAACCTTACTTTTCTTCAAACTCTCAGAATCAGGGATTTCCCAAAATTGAAGGAGTTACCAAATGGACCCTTTAACCTAGCTTTGGAGACTCTGGGTATCGCTAACTGTGATGAGCTTGAGTCTTTACCAGAGCAAAATTGGGAAAGTCTACAATCCCTTCGAATTCTACAGATTTGGAGATGTGAAGGATTGCGATGGTTGCCGGAGGACAGAGAGGCTCCTGATATTCACTTCAAGTATGAATCAGCTTCCAGATGCACAGCCATTATATATGTTTTGGAAgGTCAATTGAACAAATTCTGCTCTAGTTGCTTGATAGTTCATTATCTTATTCCGATTGAACCATTGGTTGAAGAAAGTAAGAAGAGGAATCACTTGCTTATTACACAGTTGTCGAAACTTATTTTGAGTGAGCGAAGCCAAGATATAAATGTGTGTCTGTGTGTCATGCTCTATGACGGAGTGGAAGTTCTTATGATTGCTGATTAG 3201 0.3746 MSDALLGVAFENLMSLLQNEFSTISGISSKSRKLSTTLDLIKAVLEDAEKKQLTDRSIKVWLQQLNDAVYVLDDILDECSIKSNRLNGSSSFKPTNIIFRHNIGNRLKEITSRFDAIAERKNKFLLQEGVTAKEMTGEVAEWRQTSSIIAEPKVYGREEDKEKIVEFLLNQARDSDSLSVYPIVGLGGVGKTTLTQLVYNDPRVSSANFHTKIWVCVSEVFSVKRILCSIIESIECQKCDALDLDVIQRKVQELLHGKRFLLVLDDVWNKNEELKFGLSQEKWNQLKSVLSSGSKGSSCLVSTRDEVVASIMGTCHAHHLSGLSENECWLLFKQYAFGHDREEQVELVEIGKEIAKKCGGLPLAAQALGGLMRSRSGEKEWLEIKESRLWDSHSDNFILPALRLSYSYLTPTLKQCFTFCAMFPKDTEILKEGLIHLWMAHGFISSRKNLEVEDVGSMIWNELCQKSFFQDIKTDEDSGEISFKMHDLVHDLAQLIMGQECLYLEDANMTSLSKSTHHISFHSKNLLSINKGAFKKVESLRTFFQLNRFGEKLHYFPTNHFLRILCTSFIHVPSLGSLIHLRYLELRSLDIEMLPDSICSLQKLEIFKIKHCDKLSCLPKRLACLQNLRHLVIDDCPSLSCLFPNIGKLSFLRTLSLYIVRLEKGNSLAELRDLNLGRRLSIKGLNNVGSLSEAQEANLMGKKDLQVLKLSWKIRRDEFTNTPAVNAEQVLEVLQPHSNLKRLDINYYEGLLLPSWIRILKNLVSLKLSECKNCVGLWSIGKLQSLKNLTLSGMDNIKYLDDECHDGMEVRIFPSLEVLRLRNLANIEWLLKVESGDMFPCLSYLEIDECPKLVLPFLPSLKQLDVHGCNNELLRSISTFCSLTSLFLGRGDEGITSFPEGMFTNLTFLQTLRIRDFPKLKELPNGPFNLALETLGIANCDELESLPEQNWESLQSLRILQIWRCEGLRWLPEDREAPDIHFKYESASRCTAIIYVLEGQLNKFCSSCLIVHYLIPIEPLVEESKKRNHLLITQLSKLILSERSQDINVCLCVMLYDGVEVLMIAD 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02849 1066 Gene3D - 412 491 IPR036388 -
Tsu05g02849 1066 CDD RX-CC_like 11 119 IPR038005 -
Tsu05g02849 1066 PANTHER OS05G0414200 PROTEIN 30 923 - -
Tsu05g02849 1066 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 420 IPR027417 -
Tsu05g02849 1066 Pfam Rx N-terminal domain 6 92 IPR041118 -
Tsu05g02849 1066 PRINTS Disease resistance protein signature 358 372 - -
Tsu05g02849 1066 PRINTS Disease resistance protein signature 254 268 - -
Tsu05g02849 1066 PRINTS Disease resistance protein signature 180 195 - -
Tsu05g02849 1066 PRINTS Disease resistance protein signature 758 774 - -
Tsu05g02849 1066 Gene3D - 138 317 IPR027417 -
Tsu05g02849 1066 Gene3D Ribonuclease Inhibitor 856 977 IPR032675 -
Tsu05g02849 1066 Gene3D Ribonuclease Inhibitor 492 665 IPR032675 -
Tsu05g02849 1066 Gene3D Ribonuclease Inhibitor 666 855 IPR032675 -
Tsu05g02849 1066 PANTHER DISEASE RESISTANCE PROTEIN RP 30 923 IPR044974 GO:0006952
Tsu05g02849 1066 Gene3D - 6 122 - -
Tsu05g02849 1066 SUPERFAMILY RNI-like 812 973 - -
Tsu05g02849 1066 SUPERFAMILY L domain-like 484 850 - -
Tsu05g02849 1066 Pfam NB-ARC domain 157 406 IPR002182 GO:0043531
Tsu05g02849 1066 Gene3D - 322 410 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02849 Tsu-Chr5 38674928 38678605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02849 183 793 WRKY Transcription Factor Family AT5G45050 21.870 4.52e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02849 - - mtr:MTR_5g071220 1356.27