Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02840 ATGGCCGAGGCTTTACTTGAAGCAGCGTTTGAGAATTTGAATTCTCTGCTACAAAATGAATTGTCCACACTGTTTGGAATCAGGTCAAAGGCTGAAAAGCTATCAACCACCTTGAATCTCATCAAGGCTGTTCTTGAAGACGCTGAAAAGAAACAACTCACAGACCGCTCTATTCAGGTATGGCTACAACAACTCAAAGATGCTGTATATGTGCTCGATGATATTCTTGATGAGTGTTCCATCGAATCCAATCGACTTAAGGGCTCATCCGCTTTCAAACCAAATAATATCATTTTTCGCCACAACATTGGAAAGAGGTTAAAAGATATTACAAGCAGATTCGATGAAATTGCAGACATGAAGAACAAGTTTCTTCTACAAGCGGGTGTTACTGGTAAGGAAATGACAGTTGATGTGGCTGAATGGCGTCAAACTAGCTCGATTATTGCTGAACCCAAAGTGTACGGACGAGAAGATGATAAAGAGAAGATTGTCAAGTTTCTTACCAACCAAGCGAGGGACTCAGACTTCCTTTCCGTCTATCCCATTGTTGGCTTAGGTGGTGTTGGAAAAACAACTCTCACTCAATTGGTCTACAATGATCCAAGGGTGAGTACTACCAATTTTCATACAAAGATATGGGTTTGTGTTTCTGAAGTTTTCTCGGTCAAGAGGATTCTATGTTCCATTATAGAATCTATCAAAAGTGAGAAGTGTGTTGCCTTAGATTTAGATGTAATACAAAGAAAGGTGCAAGAACAATTGCAAGGAAAAAGATTTTTGCTAGTTTTAGATGACGTTTGGAACAAAAATGAAGAACTAAAATTCGGATTCAGCCAAGAGAAATGGAACCAGTTGAAATCAGTGTTGTCCAGTGGATCCAAAGGTAGTTCTTGTTTAGTTTCAACCCGTGATGACGTTGTTGCATCAATCATGGGAACATGTCATGCTCATCATTTGTGTGGTCTCTCTGAAAATGAATGTTGGTTGTTATTCAAACAATATGCATTTGGACATGACAGAGAAGAACAAGTAGAGCTAGTGGAAATAGGCAAGCATATAGCAAAAAAGTGCGGGGGATTGCCTCTTGCTGCACAAGCATTGGGTGGTTTAATGCACTCAAGGAGTGGAGAAAAGGAATGGCTTGAAATTAAGGATAGTAGAATTTGGGATTCACCGCGTGACAATTATATTTTGCCAGCCTTGCGGTTGAGTTACACTTATTTGACGCCGACCTTAAAGCAGTGTTTCACTTTTTGTGCCATGTTTCCCAAAGATACTGAAATCCTGAAGAAAGAATTGATTCATCTTTGGATGGCTCATGGATTTATTTCATCTAGGAAAAATTTGGAGGTTGAAGATGTTGGCTGCATGATTTGGAATGAACTGTGCCAAAAATCATTCTTTCAAGACATTAAGATGGATGAAGATTCTGGTGACATTTCATTCAAGATGCATGATCTTGTCATGATCTTGCTCAATCAATAA 1488 0.3918 MAEALLEAAFENLNSLLQNELSTLFGIRSKAEKLSTTLNLIKAVLEDAEKKQLTDRSIQVWLQQLKDAVYVLDDILDECSIESNRLKGSSAFKPNNIIFRHNIGKRLKDITSRFDEIADMKNKFLLQAGVTGKEMTVDVAEWRQTSSIIAEPKVYGREDDKEKIVKFLTNQARDSDFLSVYPIVGLGGVGKTTLTQLVYNDPRVSTTNFHTKIWVCVSEVFSVKRILCSIIESIKSEKCVALDLDVIQRKVQEQLQGKRFLLVLDDVWNKNEELKFGFSQEKWNQLKSVLSSGSKGSSCLVSTRDDVVASIMGTCHAHHLCGLSENECWLLFKQYAFGHDREEQVELVEIGKHIAKKCGGLPLAAQALGGLMHSRSGEKEWLEIKDSRIWDSPRDNYILPALRLSYTYLTPTLKQCFTFCAMFPKDTEILKKELIHLWMAHGFISSRKNLEVEDVGCMIWNELCQKSFFQDIKMDEDSGDISFKMHDLVMILLNQ 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02840 495 Coils Coil 31 51 - -
Tsu05g02840 495 CDD RX-CC_like 2 119 IPR038005 -
Tsu05g02840 495 Gene3D - 322 404 IPR042197 -
Tsu05g02840 495 Gene3D - 6 120 - -
Tsu05g02840 495 PANTHER OS05G0414200 PROTEIN 27 492 - -
Tsu05g02840 495 Gene3D - 405 495 IPR036388 -
Tsu05g02840 495 PRINTS Disease resistance protein signature 180 195 - -
Tsu05g02840 495 PRINTS Disease resistance protein signature 254 268 - -
Tsu05g02840 495 PRINTS Disease resistance protein signature 358 372 - -
Tsu05g02840 495 PANTHER DISEASE RESISTANCE PROTEIN RP 27 492 IPR044974 GO:0006952
Tsu05g02840 495 Gene3D - 138 317 IPR027417 -
Tsu05g02840 495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 420 IPR027417 -
Tsu05g02840 495 Pfam NB-ARC domain 157 386 IPR002182 GO:0043531
Tsu05g02840 495 Pfam Rx N-terminal domain 6 98 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02840 Tsu-Chr5 38624327 38625934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02840 163 423 WRKY Transcription Factor Family AT5G45050 24.621 2.01e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02840 - - mtr:MTR_5g071220 711.449