Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02835 ATGGAAGTTGTTGATGAGAATGAACAACTTATTattgaagaaaacaaagagCATGTAGTTGTTTCACATGTTAACAATGATTCACATGTTAGTGATTCAAATTCTAATGAAAGTCAAGAACCATACATTGGAATGGAATTTGAGTCACAAGAAATTGCTTATTCATTTTATGCTGACTATGCAAAATTTAATGGGTTTGGGATTTCCATCAAAACTAGTCGCCGTTCAAAGGTTTCTAGAGAATTCATTGATGTAAAATATGCTTGCATGAGGTATGGGAAAAAGCAAGAATCCACTGCAATTAACCCACGTCCTTGTTTGAAGGTGGAGTGCGAGGCTTACTTACGCATAAAAAGAAAGTGTGATGGGAAATGGGTTGTTCATGACTTCATTAAAGATCACAATCATGAGCTTTTTCCAGCACATGCACATTATTTTCCCTGCCATAGACGAATCAATAAAGCTCAAAAGAGTTATATTGAAAGTATGCAAACTGTTGGAGTGAAGACAACCAAAATTTATGCATCATTGGCCAAACAACATGGTGGATATGAAAATATTGGTTGCTTGGAGAAGGATGTTAGAAATCATTTAGATAAAAGTCGTCGTTTATCTTTAGAATCAGGAGATGCAAATGCAATGCTGGAGTGTTTTATGGCTATGCAAGAAGAAAACCCAAGATTCTTTTATGCAATTGATTTGGATGATGAGAATCGCGTGAAAAATGTATTTTGGGTGGATGCAAAAGTGGATGAAACCTCAAATACTTTCATATGGTTGATGAAAACATGGCTTAGAGCAATGGGTGGAAATCCTCCAAATGCAATAATAACTGATCAAGACAGAGCTATAAGAGAGGTCTTTCCAAATACACGACATCGGTTTTGTCTTTGGCATATACTTAGAAAGGTGCCTGAGAAGCTTAGTCATGTGTTACGAAATAATGAAGACTTCAAGAAACATTTGAATTCATGTATCTATAGGTCTTGGTCAAAAAAGCAATTTGAAGATAAATGGCAAGAAATGGTAGAAAAGTTCCAGCTGTTGGAGGATGAGTGGCTTCGGTCTTTGTACGAAGAACGTGAACATTGGGTTCCTATTTACATGAAGGATACATTTTTTGGTGGCATGTCTACAACTCAGAGATCGGAGAGCATCAATTCgttttttgacaaatatgtATGTAAGAAAACTACATTAAAGgaatttgttgaaaaatataaagtttCTCTGCATGATAGAGAAGAGGCAGAAAGGCAAGCTGATTTTAATACATGGCACAAGAAACTCATTCTTAAGACTCCATCACCTTTTGAGAAACAAATGTCTTTGATTTACACGCATGAAATCTTTAAGAAATTTCAAATAGAAGTTTTGGGATTATCTGGATGTCGTCTTATGAAAGAGAACAAGGATAGTCAGATTACTACTTTTGAAATCTTAGACTTTCAGAATAATGAAGAGTTTGTTGTAGAGCGGGATGcatcaaaaaatgaaatttcttgCTTATGTCgcttatttgagtttaatggatatcttTGTAGACCTTCATTGATGGCACTTCTCACCGTTTGTGTCTTTGCTGTCCCATCACAATATATATTAAGAAGTTGGAGCAAGGATTTAAGAAGCAAGcatcataaaagaaaaacagatgAAGATGTGTGTTCTAGTAAGGAGAGGTTTGATCGTTTATATGAAAAGAGTATTGAATTTATTGAGGAAGGATCGTTAAGTTATGAGAGTTACAATTTTGCATGTCATACACTTGGTGAAGCCTTGAAACAATGTGCAACTATTAATCAATCTTTGAAAGTGGATCAGGAAAATGTTGGTAAGAACAATTTAGGTGATATGTCACTATTTGATCCTCAACCAGCAAAAACAAAAGGAGCTTCATCACGAAGAATAAAAAGTGGGATCGAGAAAGGGCGTAAGAGACATAAAAAGGAAAGCTGA 1959 0.3359 MEVVDENEQLIIEENKEHVVVSHVNNDSHVSDSNSNESQEPYIGMEFESQEIAYSFYADYAKFNGFGISIKTSRRSKVSREFIDVKYACMRYGKKQESTAINPRPCLKVECEAYLRIKRKCDGKWVVHDFIKDHNHELFPAHAHYFPCHRRINKAQKSYIESMQTVGVKTTKIYASLAKQHGGYENIGCLEKDVRNHLDKSRRLSLESGDANAMLECFMAMQEENPRFFYAIDLDDENRVKNVFWVDAKVDETSNTFIWLMKTWLRAMGGNPPNAIITDQDRAIREVFPNTRHRFCLWHILRKVPEKLSHVLRNNEDFKKHLNSCIYRSWSKKQFEDKWQEMVEKFQLLEDEWLRSLYEEREHWVPIYMKDTFFGGMSTTQRSESINSFFDKYVCKKTTLKEFVEKYKVSLHDREEAERQADFNTWHKKLILKTPSPFEKQMSLIYTHEIFKKFQIEVLGLSGCRLMKENKDSQITTFEILDFQNNEEFVVERDASKNEISCLCRLFEFNGYLCRPSLMALLTVCVFAVPSQYILRSWSKDLRSKHHKRKTDEDVCSSKERFDRLYEKSIEFIEEGSLSYESYNFACHTLGEALKQCATINQSLKVDQENVGKNNLGDMSLFDPQPAKTKGASSRRIKSGIEKGRKRHKKES 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02835 652 MobiDBLite consensus disorder prediction 615 652 - -
Tsu05g02835 652 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 251 611 - -
Tsu05g02835 652 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 251 611 IPR031052 GO:0006355
Tsu05g02835 652 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 20 249 - -
Tsu05g02835 652 Pfam FAR1 DNA-binding domain 55 140 IPR004330 -
Tsu05g02835 652 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 249 IPR031052 GO:0006355
Tsu05g02835 652 Coils Coil 332 352 - -
Tsu05g02835 652 Pfam MULE transposase domain 251 302 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02835 Tsu-Chr5 38592541 38594745 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu05g02835 FAR1 3.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02835 - - dzi:111309578 784.252