Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02832 atGGCTGATGCTTTACTTGGAGTTGCGTTTGAGAATTTGATGTCTCTGCTTCAAAATGAATTTTCAACCATTTCTGGAATCAGTTCAAAGGCTCAAAAGCTATCAACGAACTTAGAACTGATCAAGGCTGTTCTTGAAGATGCTGAGAAGAAACAACTCACAGATCGCTCTATTAAGGTATGGCTACAACAACTCAAAGATGCTGTATATGTGTTGGATGATATTCTTGATGAGTGTTCCATTAAATCCAATCGACTTAAGGGCTCATCCGCTTTCAAACCAAAGAATATCATTTTCCGCCATAACATTGGAAACAGGTTGAAAGAAATTACAAGCAGATTCGATGAAATTGCTGAGAGGAAGAACAAATTTCATCTACAAGAGGGTGTTACTGCTAAGGAAATGACAGGTGAAGTGGCTGAATGGCGTCAAACCAGCTCAATTATTGCTGAACCCAAAGTGTACGGACGAGAAGAAGATAAAGAGAAGATTGTCGAGTTTCTTCTCAACCAAGCGAGGAACTCTGACTCCCTTTCGGTCTATCCCGTTGTTGGCTTAGGTGGTGTTGGAAAAACAACTCTCACTCAATTGGTCTACAATGATCCAAGGGTGAGTACTGCCAATTTTCATACAAAGATATGGGTTTGTGTTTCTGAAGTCTTCTCGGTCAAGAGGATTCTACGTTCCATTATAGAATCTATCGAACGTCAGAAGTGTGATGACTTGGATTTAGATGTAATACAAAGAAAGGTGCAAGAACTATTGCAtgataaaagatttttgctagTTTTAGATGACGTTTGGAACAAAAATGAAGAACTGGAATTTGGATTGAGCCAAGAGAAATGGAACCAATTGAAATCAGTGTTGTCCAGTGGATCCAAAGGTAGTTCTTGTTTAGTTTCCACCCGTGATGAGGTTGTTGCATCAATCATGGGAACATGTCACGCTCATCATTTGTCTGGTCTCTCTGAAAATGAATGTTGGTTGTTATTCAAACAATATGCATTTGGGAATGATAGAGAAGAACAAGTAGAGCTGGTGGAAATAGGCAAGGAGATAGCAAAAAAGTGCGGGGGGTTGCCTCTTGCTGCACAAGCATTGGGAGGTCTAATGCGCTCAAGGAGTGGAGAAAAAGAATGGCTTGAAATTAAAGAAAGTAGACTTTGGGATTCACAtagtgacaattttattttgccgGCCTTGAGGTTGAGCTACTCTTATTTAACTCCGACTTTAAAACAATGTTTCACTTTTTGTGCTATATTTCCCAAAGATAGAATAATGTGGAAGGAAGAATTGATTCATCTTTGGATGGCGCATGGATTTATTTCATCTAGAAAAATTTTGGAGGTTGAAGATGTTGGCAGCATGATTTGGAATGAACTGTGCCAAAAATCATTCTTTCAAGACATTAAGACGGATGAAGATTCTGGTGAGATTTCTTTCAAGATGCATGATCTTGTCCATGATCTTGCTCAATTAATAATGGGGCAAGAATGTTTGTATTTGGAGGATGCAAACATGACTAGTTTGTCAAAAAGCACACACCACATAAGTTTCCACTCCAAAAACTTGTTATCAATCAATGAGGGTGCCTTCAAAAAAGTTGAATCCTTGCGAACATTTTTTCAGCTGGAACTATATATAGAAAACCTTCATTACTTTCCAGGAAACCGTTTTCTTCGGGTTTTACGCACATCTTTTATCCACATACCATCACTAGGGAGTTTCATTCATTTAAGGTATTTGGAACTTTGTTACCTTGACATAGAAATGTTGCCTGATTCAATTTGTAGCTTACAAAAATTGgaaatattgaaaatcaaacaTTGTGATAAACTGAGTTGTCTTCCAAAACGTTTGGCTTGCTTACAAAATCTTAGACATCTAGTCATTGAACAATGTTATTCCCTATCTCGCTTGTTTCCAAACATTGGGAAAATATCTTGCCTAAGAACATTAAGTTTATACATTGTTAGTTTAGAGAAAGGTAATAGCTTGGCAGAGTTACGTGATCTAAACCTCGGTGGAGAACTGAGTATCAAAGGCTTAAATAATGTTGGGAGTTTATCTGACGGTGGTGAACTGAGTATACAAGGCTTACATAATGTTGGCAATTTATCTGAAGCTCAAGAGGCCAATTTGACGTGTAAAAAAGACCTTCAAGTATTACAGTTGTCATGGAAAATAAGAAGTGGTGAATTTACAAAGGCCCCTGCTGTTAATGCTGAACAAGTACTTGAAGTGCTTCAACCTCACTCAAATCTCAAGAGATTACAAATAGATGAGTATGAAGGATTATTGTTACCAAGTTGGATAAGTATTCTTAGTAATTTAGTTTCTCTTAAACTTTGGAATTGCAAGAATTGTGTGCGGCTACCTTCAATTGGTAAACTACAATCTCTAAAAACATTGACATTATTCAATATGGATAATATAAAATACTTGGATGATGAATGTCACGATGGTATGGAGGTGAGGATTTTCCCATCTTTAGAGGAACTCATATTAAGTAATTTACCAAACATAGAGGGGTTATTGAAAGTGGAAAGAGGGGACATGTTTCCTTGTCTTTCTGATTTGTCTATCTCCGATTGCCCTAAACTTGGACTACTTCCATGTCTTCCATCTCTTAAAGACCTCGCTGTATTGGGATGTAACAATGAGTTGCTGAGGTCAATCTCTACCTTCTGCAGTCTTATCACCCTTCAACTCGGAGGCGATGAGCTTGAGTCATTACCAAAGCAAAATTGGGAAAGTCTACAATCCCTTCGAATTATAGAGATTTGGCATTGTAAAGGATTGCGATGGTTGCCGGAGGGTATTCGACACGTCACTTCTCTTGAGGTTCTGGATATTAATGGATGTCCCGCATTGGAAGAACGATGCAAGGAGGGAACAGGGGAGGACTGGGACAAGATAGCACATATTCCAGAATTATACATTGggtga 2955 0.3756 MADALLGVAFENLMSLLQNEFSTISGISSKAQKLSTNLELIKAVLEDAEKKQLTDRSIKVWLQQLKDAVYVLDDILDECSIKSNRLKGSSAFKPKNIIFRHNIGNRLKEITSRFDEIAERKNKFHLQEGVTAKEMTGEVAEWRQTSSIIAEPKVYGREEDKEKIVEFLLNQARNSDSLSVYPVVGLGGVGKTTLTQLVYNDPRVSTANFHTKIWVCVSEVFSVKRILRSIIESIERQKCDDLDLDVIQRKVQELLHDKRFLLVLDDVWNKNEELEFGLSQEKWNQLKSVLSSGSKGSSCLVSTRDEVVASIMGTCHAHHLSGLSENECWLLFKQYAFGNDREEQVELVEIGKEIAKKCGGLPLAAQALGGLMRSRSGEKEWLEIKESRLWDSHSDNFILPALRLSYSYLTPTLKQCFTFCAIFPKDRIMWKEELIHLWMAHGFISSRKILEVEDVGSMIWNELCQKSFFQDIKTDEDSGEISFKMHDLVHDLAQLIMGQECLYLEDANMTSLSKSTHHISFHSKNLLSINEGAFKKVESLRTFFQLELYIENLHYFPGNRFLRVLRTSFIHIPSLGSFIHLRYLELCYLDIEMLPDSICSLQKLEILKIKHCDKLSCLPKRLACLQNLRHLVIEQCYSLSRLFPNIGKISCLRTLSLYIVSLEKGNSLAELRDLNLGGELSIKGLNNVGSLSDGGELSIQGLHNVGNLSEAQEANLTCKKDLQVLQLSWKIRSGEFTKAPAVNAEQVLEVLQPHSNLKRLQIDEYEGLLLPSWISILSNLVSLKLWNCKNCVRLPSIGKLQSLKTLTLFNMDNIKYLDDECHDGMEVRIFPSLEELILSNLPNIEGLLKVERGDMFPCLSDLSISDCPKLGLLPCLPSLKDLAVLGCNNELLRSISTFCSLITLQLGGDELESLPKQNWESLQSLRIIEIWHCKGLRWLPEGIRHVTSLEVLDINGCPALEERCKEGTGEDWDKIAHIPELYIG 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02832 984 PANTHER DISEASE RESISTANCE PROTEIN RP 29 961 IPR044974 GO:0006952
Tsu05g02832 984 CDD RX-CC_like 2 119 IPR038005 -
Tsu05g02832 984 Pfam Rx N-terminal domain 6 100 IPR041118 -
Tsu05g02832 984 Gene3D - 138 317 IPR027417 -
Tsu05g02832 984 PRINTS Disease resistance protein signature 944 960 - -
Tsu05g02832 984 PRINTS Disease resistance protein signature 254 268 - -
Tsu05g02832 984 PRINTS Disease resistance protein signature 358 372 - -
Tsu05g02832 984 PRINTS Disease resistance protein signature 180 195 - -
Tsu05g02832 984 Gene3D Ribonuclease Inhibitor 876 968 IPR032675 -
Tsu05g02832 984 SUPERFAMILY L domain-like 857 957 - -
Tsu05g02832 984 PANTHER OS05G0414200 PROTEIN 29 961 - -
Tsu05g02832 984 Gene3D Ribonuclease Inhibitor 495 666 IPR032675 -
Tsu05g02832 984 Gene3D - 6 122 - -
Tsu05g02832 984 Coils Coil 31 51 - -
Tsu05g02832 984 SUPERFAMILY L domain-like 484 886 - -
Tsu05g02832 984 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 420 IPR027417 -
Tsu05g02832 984 Gene3D Ribonuclease Inhibitor 667 875 IPR032675 -
Tsu05g02832 984 Pfam NB-ARC domain 157 406 IPR002182 GO:0043531
Tsu05g02832 984 Gene3D - 322 410 IPR042197 -
Tsu05g02832 984 Gene3D - 412 494 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02832 Tsu-Chr5 38562091 38566068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02832 185 657 WRKY Transcription Factor Family AT5G45050 22.841 1.11e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02832 - - mtr:MTR_5g071220 1296.95