Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02831 ATGTCTTTGTTAAGAAACCTCTCAAAATGTTACTTCTCCACCACGAAACCCTTTCTTAAACCCACAAACACAGACCCTTTTCACCGCTTCCCATCTCTCACTCTTCTCTCTCGTTTCTCAACCTCAACCATCCCTGAACCCGGTTCAACTTCTCCGGTTCGCTATGCGGGTCTTGGACCCACCAAACCAAACGAGAAACCACGAGTGGTGGTTCTTGGTACTGGTTGGGCTGGGTGTAGATTTATGAAAGGATTGGACTCACAAATCTATGATATAGTTTGTGTTTCACCTCGTAATCACATGGTTTTTACTCCTCTGTTGGCTTCTACTTGTGTTGGAACTCTTGAGTTTAGATCTGTTGCTGAACCTGTTGCTAGGATTCAACCTGCTATTTCTAATGAACCTGGTTCTTTTCTCTTTCCTGCTAATTGTACTGGTATCAATGCTGATAAACATGAGGTATCTTTCTTTTTCGTTTATTAG 483 0.4244 MSLLRNLSKCYFSTTKPFLKPTNTDPFHRFPSLTLLSRFSTSTIPEPGSTSPVRYAGLGPTKPNEKPRVVVLGTGWAGCRFMKGLDSQIYDIVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPVARIQPAISNEPGSFLFPANCTGINADKHEVSFFFVY 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02831 160 Pfam Pyridine nucleotide-disulphide oxidoreductase 68 154 IPR023753 GO:0016491
Tsu05g02831 160 SUPERFAMILY FAD/NAD(P)-binding domain 68 156 IPR036188 -
Tsu05g02831 160 PANTHER OS07G0564500 PROTEIN 46 154 - -
Tsu05g02831 160 PANTHER NADH DEHYDROGENASE 46 154 IPR045024 GO:0003954|GO:0006116
Tsu05g02831 160 Gene3D - 59 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02831 Tsu-Chr5 38551414 38551896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02831 24 154 Chloroplast and Mitochondria Gene Families AT4G21490 40.000 5.42e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02831 K03885 - gmx:100793544 201.83