Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02810 ATGGGAGCTTTTAATCTGGCTGATTATATTCCTTGGCTAGGTGTTTTTGATCTTCAGGGATTAACACGAGCTTACAAGAAAGTCAGTAAATCAATTGATGAGGTACTCGAAGTGATAATAACAGAGCATGAACAAGCTATTAATGTAGACAAAAATCGTCATGAAGATTTCGTAGACATACTTCTTTCAATTATGCACCAAAACATTGATCAAGAAAATGAACAAAATCTTGTGATTGATCGAACTCAGGTCAAGGCTATTTTACTTGACATGATAGTTGCAGCAATTGATACATCTGCTACCTCAATTGAGTGGATTTTATCTGAACTTTTAAGACATCCAAGAGTGATGAAAATTCTTCAAGATGAAATACAAAATGAAGTAGGAAACAAGAGAATGATTGAAGAAAAGGATTTGAAGATGTTGAATTACTTAGACATGGTGATTGATGAAACGCTAAGATTATATCCCGTTGCACCTTTACTAGTCCCTCGTGAATGTAGAGAGAGTATAACAATTGATggttattttataaagaaaaagacGCGAGTTATAGTGAATGCATGGACAATAGGGAGAGATCATAATGTTTGGTCAGAAAATGCCGAAGAATTTTATCCAGAGAGATTTATTGACAAGAAAATGAATTATCACGGACAAGAGTTTGAGTCTATGCCATTTGGTTTTGGTCGTAGGCGTTGTCCTGGGATTCAATTGGGTTTAATTACTGTTAAATTGGTAATTGCTCAATTGGTGCATTGCTTTAATTGGCAACTTCCCAATAATATCAATCCTTCCAATTTGAATATGGAGGAGAAATTTGGACTTTCTATGCCAAGAGCTCATAACTTATACGCAATACTGAGTTATCGTTTGGCTCATGTCAAGCATGAATAA 897 0.3434 MGAFNLADYIPWLGVFDLQGLTRAYKKVSKSIDEVLEVIITEHEQAINVDKNRHEDFVDILLSIMHQNIDQENEQNLVIDRTQVKAILLDMIVAAIDTSATSIEWILSELLRHPRVMKILQDEIQNEVGNKRMIEEKDLKMLNYLDMVIDETLRLYPVAPLLVPRECRESITIDGYFIKKKTRVIVNAWTIGRDHNVWSENAEEFYPERFIDKKMNYHGQEFESMPFGFGRRRCPGIQLGLITVKLVIAQLVHCFNWQLPNNINPSNLNMEEKFGLSMPRAHNLYAILSYRLAHVKHE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02810 298 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 227 236 IPR017972 GO:0005506|GO:0016705
Tsu05g02810 298 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 291 - -
Tsu05g02810 298 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 291 - -
Tsu05g02810 298 PRINTS E-class P450 group I signature 188 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02810 298 PRINTS E-class P450 group I signature 224 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02810 298 PRINTS E-class P450 group I signature 234 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02810 298 PRINTS E-class P450 group I signature 83 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02810 298 PRINTS E-class P450 group I signature 146 164 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02810 298 PRINTS E-class P450 group I signature 103 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02810 298 Gene3D Cytochrome P450 1 291 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02810 298 SUPERFAMILY Cytochrome P450 4 291 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02810 298 PRINTS P450 superfamily signature 234 245 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02810 298 PRINTS P450 superfamily signature 147 158 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02810 298 PRINTS P450 superfamily signature 94 111 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02810 298 PRINTS P450 superfamily signature 225 234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02810 298 Coils Coil 117 137 - -
Tsu05g02810 298 Pfam Cytochrome P450 5 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02810 Tsu-Chr5 38282759 38285049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02810 1 292 Monolignol Biosynthesis Gene Families AT4G36220 39.869 1.23e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02810 - - mtr:MTR_5g070830 496.508