Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02802 ATGAGTGTAAAACACATCTGGTTCTGGACAGTACTCACttttctgtttctgttttttctaTTGACCAATTCAGAATCAGAAAATGTTAGAAAAGCCCTTGTCACGTTCATGCATAAACTTGAACCACCTGATCAGAATTTTACATGGGGTTGGAACCTCACATCAGATCCTTGCACTCATAACTGGCACGGTGTAACTTGTTCCGCAAACAACCAATACATTAAGAGcatagttcttgaagaacttaatCTCAATGGTGTTCTAGACACGACTTCTCTTTGCATTTCTACCTCCCTTCAATTCCTCAGTGTCAACAATAACAATTTACACGGTTTTATATCAGAGGATATAAAAAACTGCAAGTTCTTGACACATTTGCTTCTTAGTGGTAACAAATTCTCCGGCAGTCTTCCTGTTTCAATTCCTCAACTACGTAACATGAAGCGCCTTCATGTTTCTGACAATCACTTCACCGGAGACCTTCCTAATATGGTGAATGTTACAAGTTTGATATCATTTCTAGCTCAAAACAACTACTTCACCGGTCAGATTCCTGATTTTGATTTCTCAAACTTTGAAGCTTTTAATGTCTCTAACAACGATTTGCACGGTCCTATTCCTGATGTTAGAGGTAGATTTGGTGCTGATAGTTTTTATGGTAATCCTAATTTATGTGGAAAACCAATTTCAAACTCTTCGTGTCCAAAACCGCCACCACCTCCTCCAATTGTTAAGAAAGACAAAATCATAAATCAATTTCTTGATGACTTACCAATATATTCAGGTTACATAGTTATtggtttaattttattgattttcttgATCTTCAAGTTGTTAAGGAAATGCAAGaccaaagataaagaaaaaggaTTAGATCATGTTGAAAAGAAGGACATGTCACAAGACACTagtgttgttgttggtggtggtgaaAAGCTTAGTGAGATACTTAACTCCAATGGATCAAAGAATTGGTTTAATGGCCTTGGGATGAGATCGGAGTATTCTATGACATCTATGGAAAGTGGAGTAACTACATCAGGTCTTGTTCTTCTTTCTAGTAGAAAGTTAAGGGGATTGCAATTTGAGGATTTGTTAAGTGCTCCTGCTGAATTGATTAGGAGAGGAAAACATGGGAGCTTATACAAGGTTATGTTAGATAATGGTGTTCTTTTGGCTGTTAAGAGGATCAAGGATTGGGGAATTTCAAAGCATGATTTTGAGAGAAGGATGAATTTGATAGCTCAAGTGAAGCATCCTCTTGTAATGTCACCTGTCGCATACTATTGTTCTCAGCAAGAGAAGCTTCTGGCTTATGAATATCTTCCAAATGGTAGTCTCTTCATGTTGCTCTATGGATCTCAAAGCGGACATTCGCTTGACTGGAGGAGCAGATTAGATGTTGCTACTAAGATAGCTGAAGCTTTGGCCTATATGCACGAGGAGCTTGGTGAGAGTGGAATAGCACATGGCAACTTAAAATCAAGTAACATTCTGTTTGACAAGAATATGATTCCACAAATAAGCGAATATGGCCTAATGGTTTCTCATATAAAAGgcataaaaaacagaaatatgTCTGCAGCATCATTCAGAGCAGATATATACGCCTTTGGTGTTATACTTCTGGAACTCCTGACAGGGAAAGTGGTTAAAAACGATGGATTTGATTTGGTTAAGTGGGTGAATTCAGTGATCAGTGAAGAATGGACTGCAGAAGTTTTTGACAGGTACCTAATCTCACAAGGTGCTTCTGAAGAGAGGATGGTGAACTTGTTGCAGGTGGCATTGAAATGCATAAATCCTTCTCCAAATGACAAGCTAAGTATGAATCAAGTGGCACGCATCACAAATGCATTGAAAGATGAAGATGACAAATCCATATCCTTTGACACATTGAGAGTTTAG 1908 0.359 MSVKHIWFWTVLTFLFLFFLLTNSESENVRKALVTFMHKLEPPDQNFTWGWNLTSDPCTHNWHGVTCSANNQYIKSIVLEELNLNGVLDTTSLCISTSLQFLSVNNNNLHGFISEDIKNCKFLTHLLLSGNKFSGSLPVSIPQLRNMKRLHVSDNHFTGDLPNMVNVTSLISFLAQNNYFTGQIPDFDFSNFEAFNVSNNDLHGPIPDVRGRFGADSFYGNPNLCGKPISNSSCPKPPPPPPIVKKDKIINQFLDDLPIYSGYIVIGLILLIFLIFKLLRKCKTKDKEKGLDHVEKKDMSQDTSVVVGGGEKLSEILNSNGSKNWFNGLGMRSEYSMTSMESGVTTSGLVLLSSRKLRGLQFEDLLSAPAELIRRGKHGSLYKVMLDNGVLLAVKRIKDWGISKHDFERRMNLIAQVKHPLVMSPVAYYCSQQEKLLAYEYLPNGSLFMLLYGSQSGHSLDWRSRLDVATKIAEALAYMHEELGESGIAHGNLKSSNILFDKNMIPQISEYGLMVSHIKGIKNRNMSAASFRADIYAFGVILLELLTGKVVKNDGFDLVKWVNSVISEEWTAEVFDRYLISQGASEERMVNLLQVALKCINPSPNDKLSMNQVARITNALKDEDDKSISFDTLRV 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02802 635 Gene3D Phosphorylase Kinase; domain 1 339 441 - -
Tsu05g02802 635 SUPERFAMILY Protein kinase-like (PK-like) 371 615 IPR011009 -
Tsu05g02802 635 Gene3D Ribonuclease Inhibitor 26 209 IPR032675 -
Tsu05g02802 635 SUPERFAMILY L domain-like 27 212 - -
Tsu05g02802 635 ProSiteProfiles Protein kinase domain profile. 367 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02802 635 PANTHER LRR RECEPTOR-LIKE KINASE 8 631 - -
Tsu05g02802 635 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Tsu05g02802 635 PANTHER OS05G0588300 PROTEIN 8 631 - -
Tsu05g02802 635 Pfam Protein kinase domain 373 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02802 635 Gene3D Transferase(Phosphotransferase) domain 1 442 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02802 Tsu-Chr5 38163085 38165683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02802 46 623 Receptor kinase-like Gene Family AT2G36570 34.748 4.00e-97 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu05g02802 Pkinase 9.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02802 - - pvu:PHAVU_009G180700g 802.357