Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02799 ATGCGAAGAGAAGAACATTATCAGCAAAGAAGAGATGCAACAGAGGTGGCCATTTCTGGACAGTCTCACAGGCTTCCAAAATATTCCACAATTTCCAATTCAtctcaaaatttcaaatcaaagACACGCAGAATTTTCTCCTTGGTTTCTCGCTCTCAATGTCTCCCTCGGTTTCATCCTTCTCTACTTCATATATTagGAAGAGACACTCaaagaggaagaaacataaACAAGTTTAGCACTGCTGCAGAAGCTGATGAATTAATCACTCCATCTGTGAAAATAAGATACACAAAGAATCTCATAAATGGAGAATTTGTGGATGCTGCATCAGGAAAAACTTTTCCTGCTTATGATCCACGAAGTGGGGAAGTGATTGCTCATGTTGCTGAAGGTGATCAAGAAGATATAAATCGTGCAGTATCTGCAGCTAGAAAAGCTTTTGATGAAGGACCATGGCCAAAGATGACACCTTATGAAAGATCACGAATACTATTGCGCGCCGCTGATTTGGTTGAGAAACATAGTGATGAACTTGCAGCATTGGAAACATGGAACAATGGCAAGCTTTATGAACAATCTGCAAACATTGAAGTACCCATGTTTGTCCGTATGCTTCACTACTATGCCGGTTGGGCAGATAAAATCCATGGTCTCACAGTTCCAGCTGATGGGAATTATCATGTACAAGTATTACATGAACCAATAGGGGTTGCAGGACAAATTATACCTTGGAACTTTCCTTTATTGTTGTTTGCTTGGAAAGTTGGTCCTGCATTAGCATGTGGTAATACTGTAGTAGTAAAGACTGCTGAACAAACACCTTTAACTGCTTTATTTGCAGCACACCTATTTCAAGAGGCTGGTCTTCCACCAGGAGTTCTGAATGTTGTGTCTGGTTTTGGTCCAACTGCTGGTTCTGCCCTTGCTAGTCATATGGATGTGGATAAGATAGCATTCACCGGATCAACTGACACAGGAAAAATAATATACCAATTGGCTGCAAAAAGCAATCTTAAGGCAGTGACATTGGAGCTTGGAGGAAAATCGCCATTTATAGTGTGTGAGGATGCTGATGTTGACAAGGCTGTGGAACTTGCACATTTTGCTTTGTTCTTTAATCAGGGTCAATGTTGCTGTGCTGGGTCGCGTACTTATGTTCACCAGCGAATATATGACGAGTTCTTGGAGAAAGCCAAGGCAGCTGCTTTGAAACGCGTTGTTGGCGATCCATTCAAAAAAGGTGTAGAGCAAGGCCCTCAGATTGATTCACAACAGTTTGAGAAAATCCTCCGTTACATTAGGTCAGGTGTTCAAAGTAACGCTACTCTAGAATGTGGTGGTGACAGAATTGGCACAAAAGGATTCTTTGTCCAACCAACGGTCTTCTCAAATGTTCAGGATGATATGGCAATAGCTAAGGATGAAATATTCGGCCCTGTTCAAACCATATTGAAATTCAAAGACAATGATGAAGTAATAAGAAGGGCCAATAATACACGTTATGGTCTTGCTGCTGGCGTGTTCACAAAGAATTTGGACACAGCCAATACATTGATGAGAGGATTGAGGGCAGGAACGGTGTGGATTAATTGCTTTGATGTGTTTGATGCTGCAATTCCCTTTGGTGGGTACAAGATGAGTGGTGTAGGAAGGGAGAAAGGTATCTATAGTCTTCATAATTACTTGCAAGTTAAGGCTGTGGTTGCACCTCTTAAGAATCCCGCATGGTTGTAA 1737 0.4076 MRREEHYQQRRDATEVAISGQSHRLPKYSTISNSSQNFKSKTRRIFSLVSRSQCLPRFHPSLLHILGRDTQRGRNINKFSTAAEADELITPSVKIRYTKNLINGEFVDAASGKTFPAYDPRSGEVIAHVAEGDQEDINRAVSAARKAFDEGPWPKMTPYERSRILLRAADLVEKHSDELAALETWNNGKLYEQSANIEVPMFVRMLHYYAGWADKIHGLTVPADGNYHVQVLHEPIGVAGQIIPWNFPLLLFAWKVGPALACGNTVVVKTAEQTPLTALFAAHLFQEAGLPPGVLNVVSGFGPTAGSALASHMDVDKIAFTGSTDTGKIIYQLAAKSNLKAVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTYVHQRIYDEFLEKAKAAALKRVVGDPFKKGVEQGPQIDSQQFEKILRYIRSGVQSNATLECGGDRIGTKGFFVQPTVFSNVQDDMAIAKDEIFGPVQTILKFKDNDEVIRRANNTRYGLAAGVFTKNLDTANTLMRGLRAGTVWINCFDVFDAAIPFGGYKMSGVGREKGIYSLHNYLQVKAVVAPLKNPAWL 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02799 578 Pfam Aldehyde dehydrogenase family 106 568 IPR015590 GO:0016491
Tsu05g02799 578 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 102 566 IPR016162 GO:0016491
Tsu05g02799 578 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 348 537 IPR016163 GO:0016620
Tsu05g02799 578 SUPERFAMILY ALDH-like 93 571 IPR016161 GO:0016491
Tsu05g02799 578 CDD ALDH_F2BC 95 569 - -
Tsu05g02799 578 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 65 578 - -
Tsu05g02799 578 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 344 351 IPR029510 GO:0016491
Tsu05g02799 578 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 372 383 IPR016160 GO:0016491
Tsu05g02799 578 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 65 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02799 Tsu-Chr5 38140136 38147560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02799 43 578 Aldehyde Dehydrogenase Gene Family AT3G48000 75.978 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02799 K00128 - tcc:18603880 914.064