Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02782 ATGTCTTCTGCAGCAATAACAATACTAGCTTTCCTTCTTTTCACTTTCTTATACATCTTATTCAATCTTGTCTCACATACCATTACCCATAAGAAGCCACCTGGTCCACCAACACTACCAATAATTGGAAATCTTCACATATTAGGAAAACTTCCACATCGAACACTTCAATCACTCTCCAAAAAATATGGTCCAATCATGTCCTTACAACTTGGTCAAGTTCCAGCTATTATCATTTCATCTTCAAAAGCAGCTGAATCATTCCTCAAAACTCATGACATCGTTTTTGCAAGCCGGCCAAAAATTCAAGGATCTGAGCTAATGTCTTATGGTTCTAAAGGGTTGGCGTTTTCGGCGTATGGTGGTTATTGGCGTAGCATAAGGAAACTTTGCACTATGGAACTTCTTAGTGCTTCAAAAGTTGAGATGTTTGGTCCTATTAGAAAAGAGGAGTTATGTGTTTTGGTTAAATCTTTAGAGAAAGCAGGTTTGGTGGGTGAGGTTGTGAATGTTAGTGAGGCTCTAGGGAATCTTATTGAAGATATTGTGTATAAGATGATATTGGGTCGAAGTAAGTGTGAACAATTTGAGTTGAAGAGGTTAGTTAAGAAAGGAATGACTTTAATTGGATCTTTTAATCTGGCTGATTATGTTCCTTGGCTGGGTGCATTTGATCTTCAGGGATTAACACGGGCCTGCAAGGAAATTAGTAAAGCAGTTGATGATGTGTTGGAGGTGATAATAACAGAGCATGAACAAATTACTAATAAAGACAAAATTCAGCATAAAGATTTTGTAGATATACTTCTCTCAATTATGCACCAAAGCATAGATCCAGAAAATGAACAAAGCCATGTCATTGATCGAACTAACATTAAGGCAATTTTATTAGACATGATTGTAGCAGCAATTGAAACATCCGCAACTGCGATAGAATGGGCTTTATCTGAACTTTTAAGGCATCCAAAAGTAATGAAAAATCTTCAAGATGAGATACAAAATAAAGTAGGAAATAAAAGAATGGTTGGAGAAAAAGATTTGGAGAAGTTATGTTACTTAGATATGGTGGTTGATGAGACGTTAAGACTTTACCCTGTTTTACCTTTACTACTCCCTCGTGAATGTAGAGAGAGCACAATAATTGATGGTTATTTTATAAAGGAAAAGACACGAGTTATAGTAAATGCATGGACAATAGGGAgagatcctaacgtttggtcaGCAAATTCCAAAGAATTTTATCCAGAAAGatttattgacaaaaaaatgaattatcaaGGACAAGCATTTGAATGTATACCATTTGGTTCTGGTCGTAGACGTTGTCCTGGAATTCAATTGGGTTTAATTACGATTAAGTTGATAATAGCTCAATTGGTGCATTGTTTTAATTGGGAACTTCCGTATAATATTACTCCTTCTAATTTGAATATGGAGGAGAAATTTGGTCTCTCTATACCAAGAGCTCAACACTTGCTTGCAATACCAAGTTATCGTTTGGCAAGTGATGCCAAGCATGAATAG 1524 0.3504 MSSAAITILAFLLFTFLYILFNLVSHTITHKKPPGPPTLPIIGNLHILGKLPHRTLQSLSKKYGPIMSLQLGQVPAIIISSSKAAESFLKTHDIVFASRPKIQGSELMSYGSKGLAFSAYGGYWRSIRKLCTMELLSASKVEMFGPIRKEELCVLVKSLEKAGLVGEVVNVSEALGNLIEDIVYKMILGRSKCEQFELKRLVKKGMTLIGSFNLADYVPWLGAFDLQGLTRACKEISKAVDDVLEVIITEHEQITNKDKIQHKDFVDILLSIMHQSIDPENEQSHVIDRTNIKAILLDMIVAAIETSATAIEWALSELLRHPKVMKNLQDEIQNKVGNKRMVGEKDLEKLCYLDMVVDETLRLYPVLPLLLPRECRESTIIDGYFIKEKTRVIVNAWTIGRDPNVWSANSKEFYPERFIDKKMNYQGQAFECIPFGSGRRRCPGIQLGLITIKLIIAQLVHCFNWELPYNITPSNLNMEEKFGLSIPRAQHLLAIPSYRLASDAKHE 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02782 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Tsu05g02782 507 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02782 507 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02782 507 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02782 507 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02782 507 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02782 507 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02782 507 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02782 507 Gene3D Cytochrome P450 25 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02782 507 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02782 507 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02782 507 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02782 507 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02782 507 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 501 - -
Tsu05g02782 507 SUPERFAMILY Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02782 507 Pfam Cytochrome P450 33 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02782 507 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02782 Tsu-Chr5 37943470 37946548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02782 30 496 Cytochrome P450 AT3G26330 39.040 3.33e-123 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02782 - - mtr:MTR_5g470730 641.728