Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02767 ATGGCTCCTAGTTTCTATTCCCTTCCCCTACTCTTGTCTTTAATTTTCTTCATACTCACAGTTAATTCAATTCACTTCCAAATTCCCCGTTTTGATCCAAGTGATGCCAACATAATCTACAAAGGTTCTGCAGCAGCAGTTGATGGAGTAGTTAACTTTAAAATATATGACAATTTTTCATGTCAAGTTGGAAGGGCCATCTATTCCAAAAGGGTGTTACTTTGGGACTCAAACACAGGTCAACTCGGTGACTTCACAACTCATTACACTTTTATCATAAACACCAGGAATAAATCTTCATATGGCTATGGCCTAACCTTTTTCTTGGCACCTTTTGGAATATTAGAAATCCCACCCAATTCTTCTAGTGGCTTTTTTGGCCTATTTAACACCACAACAATGGATTCATCATCTATTAACCAAATTGTTCATGTGGAGTTTGATTCTTACCCAGATGATAGATGGGGTGAGACAATACAACATGTTGGAATCAACAATAATTCAATCATTTCATCAGTATCAACACCTTGGAATGCAAGTTTCCATAGTGGAGACACTGCTGAGGTAAGTATTAGCTACAATTCTACCACCAAGAATTTGACTGTATCTTGGAAATATCAAACCACCTCTAATCCACTAGAGAAAACTAATCTCTCATATCAAATTGATTTAATGAAAGTCTTACCTGAATGGGTCACTGTAGGATTTTCTACTTCAACCGGtgaatttaaagaaataaataatctTTTGTCATGGGAGTTTAATTCCACTTTGGACAAAAGTGATGATGTTAATactaaaaagacaaaattaattgGTATAGTAACAGTCTCTTGTGGAGTTGTTGTATTAGGAGTGGTAGCATTTGTAGCATATgttatttttaagaataaaagaaagagaagtAAAAAGCAAAAGGAAGAGGCCATGCATTTAACTTCAATGAATGATGACCTTGAAAGAGGAGCGGGGCCAAGAAGGTTTACCTACAAAGAACTTTATTTGGCTACCAATAACTTCTCTAGGGATAGAAAGTTGGGTCAAGGTGGATTTGGAGCTGTTTTCAAAGGTTACTTTTATGATTTAGATTTACAAGTTGCTGTGAAGAAAATATCAAGTGGGTCAAGACAAGGGAAGAAAGAATATGTAACTGAAATTAAAGTCATTTGTCAGTTAAGACACCGAAATCTTGTGAAGTTGTTAGGTTGGTGTCATGAGAAAGGTGAGTTACTTCTTGTTTATGAGTTTATGCCAAATGGTAGTCTTGATTCTCATTTATTTGGTAAGAGAGCACCTCTTTCTTGGAGTGTAAGGCACAAAATAGTTCTTGGATTAGCCTCCGGTTTGCTTTATATACATGAAGAATGGGAGAGGTGTGTGGTACATAGGGATATTAAATCAAGTAATGTTATGTTAGATTCTAGTTTCAATGTCAAGCTTGGTGATTTTGGGTTGGCTAAATTAATGGATCACGAACTCGAGCCGCAAACAACTGGGCTAGCCGGAACATTCGGCTATTTAGCTCCGGAATATGTCAGTACAGGCAGGGCTAGTAAAGAGTCAGATGTGTATAGTTTTGGGATAGTTGTCTTAGAGATAACTACCGGAAAGAAAGCTACTgcaattttgaaagaaaaatatgaacaGAAGGAAATGATTGAATGGGTTTGGGATCATTATGGAAGAGGAGAGATACTTATGGCCATGGATGAGAATTTGAAAAGGGATTTTGATGAGAAACAAGTAGAGTGTTTGATGATCGTTGGATTATGGTGTGCTCATCCTGATGTAAATCTTAGACCGTCGATTAAACAAGCGATTCAAGTGCTTAATTTTGAGGTTTCTTTACCAAATCTTCCACTCAAGAGGCCTATTGCAACCTATCATGCTCCTACATTTTGA 1902 0.3565 MAPSFYSLPLLLSLIFFILTVNSIHFQIPRFDPSDANIIYKGSAAAVDGVVNFKIYDNFSCQVGRAIYSKRVLLWDSNTGQLGDFTTHYTFIINTRNKSSYGYGLTFFLAPFGILEIPPNSSSGFFGLFNTTTMDSSSINQIVHVEFDSYPDDRWGETIQHVGINNNSIISSVSTPWNASFHSGDTAEVSISYNSTTKNLTVSWKYQTTSNPLEKTNLSYQIDLMKVLPEWVTVGFSTSTGEFKEINNLLSWEFNSTLDKSDDVNTKKTKLIGIVTVSCGVVVLGVVAFVAYVIFKNKRKRSKKQKEEAMHLTSMNDDLERGAGPRRFTYKELYLATNNFSRDRKLGQGGFGAVFKGYFYDLDLQVAVKKISSGSRQGKKEYVTEIKVICQLRHRNLVKLLGWCHEKGELLLVYEFMPNGSLDSHLFGKRAPLSWSVRHKIVLGLASGLLYIHEEWERCVVHRDIKSSNVMLDSSFNVKLGDFGLAKLMDHELEPQTTGLAGTFGYLAPEYVSTGRASKESDVYSFGIVVLEITTGKKATAILKEKYEQKEMIEWVWDHYGRGEILMAMDENLKRDFDEKQVECLMIVGLWCAHPDVNLRPSIKQAIQVLNFEVSLPNLPLKRPIATYHAPTF 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02767 633 PANTHER PUTATIVE-RELATED 17 632 - -
Tsu05g02767 633 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Tsu05g02767 633 ProSitePatterns Protein kinases ATP-binding region signature. 346 370 IPR017441 GO:0005524
Tsu05g02767 633 Gene3D Transferase(Phosphotransferase) domain 1 417 631 - -
Tsu05g02767 633 Pfam Legume lectin domain 24 268 IPR001220 GO:0030246
Tsu05g02767 633 ProSitePatterns Legume lectins alpha-chain signature. 228 237 IPR000985 -
Tsu05g02767 633 PANTHER - 17 632 - -
Tsu05g02767 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Tsu05g02767 633 ProSiteProfiles Protein kinase domain profile. 340 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02767 633 SMART serkin_6 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02767 633 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 262 IPR013320 -
Tsu05g02767 633 Pfam Protein kinase domain 341 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02767 633 SUPERFAMILY Protein kinase-like (PK-like) 320 624 IPR011009 -
Tsu05g02767 633 Gene3D - 21 272 - -
Tsu05g02767 633 CDD STKc_IRAK 346 611 - -
Tsu05g02767 633 CDD lectin_legume_LecRK_Arcelin_ConA 24 258 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02767 Tsu-Chr5 37748942 37750843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02767 10 629 Receptor kinase-like Gene Family AT5G10530 58.188 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu05g02767 Pkinase 2.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02767 - - mtr:MTR_8g067690 910.212