Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02766 ATGTTCTTCACATTCCCTTCTAATTCAATTCACTTCCAATTTTCCCGTTTTATTCCAGGTGATCCCAACATAGTCTACCAAGGTGCTGCAGCACCAATTGATGGAAAAGTTGATTTCAACATCAATAAAGATTATTCATGTCAAGTTGGAAGGGCCATTTATGCCAAAAGGGTGTTACTCTGGGACTCAAAAACAGGACAACTCCCTAACTTCACAACTCATTTCACCTTCATTATTGATACTCCAAATCAAAATCACACACCTGGTGATGGattttccttcttctttggtCCTTTTGGAATTGACATCCCACCCAATTCTTCAAGTGCTCTTTTGGGCTTATTTAACGCAACAACGTTGAATTCAACTGATAATCATATTGTTCATGTGGAATTTGATTCTTTCTCAAATTCTGAAAGGGGTGAGATGGGACAACACGTAGGAATCAATGAGAACTCAATTTATTCGTCAATTTGGACACCATGGAATGCCTTACTACACAGTAAAGACACTGCTGAGGTATGGATTAGCTACAATTCTACTACAACAAATTTGACTGTATCTTGGAAATATCAAAACACCTATAATCCTCAAGAAAAAACCAGCCTTTCATATCAAATTGATTTAATGAAGGTCTTACCTGAATGGGTTACTGTAggattttcttcttcaacagGTTCCATTGGAGAAAAGCACATCCTTCTATCGTGGGAATTCAGCTCAAATTTGGATcaaagtgatgatgatgatgatacatTAAAGATAAGATTAGTTGTGTTAGTAACGGTCTCTATTGGGGTTGTAGCATTTGGAGCACTAACAATATTTGCATTACTTTGgataaaaagaaagagaagtaGAAAGCAAAAGGAAGAGGCTATGCATTTAAGATCAATGAATCATGATCTTGAAAGAGGAGCAGGGGCGAGAAGATTTACCTACAAAGAACTTGATTTAGCTACCCATAATTTCTCTAGCGATAGAAAATTGGGTCAAGGTGGATTTGGAGCTGTTTATAAAGGTTACTTTTTTGATCTAGATTTATCGGTTGCTGTGAAGAAAATATCAAGAGGATCAAGACAAGGTAAGAAAGAGTATGTAACTGAAGTTAAAGTCATTAGTCAACTAAGACATAGGAATCTTGTCAAGCTCTTAGGTTGGTGCCATGAGAAAGGTGATTTTCTACTTGTTTATGAGTTGATGCCAAATGGTAGCCTTGATTCTCATTTATTTGGTAAAAGGGCACCTCTTCCTTGGAGTGTAAGGCACACAATAGCTATTGGTTTAGCCTCTAGTGTGCTATATCTACATGAAGAAGGAGAGAGGTGTGTGGTTCATAGGGATATCAAATCAAGCAATGTTATGCTAGATTCTAGTTTCAATGTTAAGCTTGGTGACTTTGGGTTGGCTAAGTTAATGGACCATGGGATTGGTCCCCAAACAACGGTGGTTGCCGGAACCTTAGGCTATTTGGCTCCAGAATATATAAGTACAGGTAAGGCTAGCAAAGAGTCAGATGTTTATAGTTTTGGAGTTGTTGCCTTGGAGATCGCAACCGGAAGGAAAGCTGTTGAAGTTATGAGTGACAAAGATGGAGAGAAGGGATTGATTGAGTGGGTTTGGGATCATTATGGAAGAGGAGAACTATTTGAGGCCATAGATGGGAATTTACAAAAGAATTTTGATGAGAAACAAGTAGAATGTTTGATGATTGTTGGTCTTTGGTCTACTCATCCTGATGTAAATCTAAGACCATCGATTAAACAAGTTATTCAAATGCTTAATTTTGAGGCTGGCCTTCCAAATCTTCCATCAAAGAGGCCTGTTGCAACCTATCACACTCCTCCACCGCTTGTAAGCTCGGTAGGAGTTTCCATAACCACGAGCCTTCAAGATGGTCGTTAA 1905 0.3701 MFFTFPSNSIHFQFSRFIPGDPNIVYQGAAAPIDGKVDFNINKDYSCQVGRAIYAKRVLLWDSKTGQLPNFTTHFTFIIDTPNQNHTPGDGFSFFFGPFGIDIPPNSSSALLGLFNATTLNSTDNHIVHVEFDSFSNSERGEMGQHVGINENSIYSSIWTPWNALLHSKDTAEVWISYNSTTTNLTVSWKYQNTYNPQEKTSLSYQIDLMKVLPEWVTVGFSSSTGSIGEKHILLSWEFSSNLDQSDDDDDTLKIRLVVLVTVSIGVVAFGALTIFALLWIKRKRSRKQKEEAMHLRSMNHDLERGAGARRFTYKELDLATHNFSSDRKLGQGGFGAVYKGYFFDLDLSVAVKKISRGSRQGKKEYVTEVKVISQLRHRNLVKLLGWCHEKGDFLLVYELMPNGSLDSHLFGKRAPLPWSVRHTIAIGLASSVLYLHEEGERCVVHRDIKSSNVMLDSSFNVKLGDFGLAKLMDHGIGPQTTVVAGTLGYLAPEYISTGKASKESDVYSFGVVALEIATGRKAVEVMSDKDGEKGLIEWVWDHYGRGELFEAIDGNLQKNFDEKQVECLMIVGLWSTHPDVNLRPSIKQVIQMLNFEAGLPNLPSKRPVATYHTPPPLVSSVGVSITTSLQDGR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02766 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Tsu05g02766 634 Gene3D - 7 256 - -
Tsu05g02766 634 PANTHER PUTATIVE-RELATED 7 629 - -
Tsu05g02766 634 ProSitePatterns Legume lectins alpha-chain signature. 213 222 IPR000985 -
Tsu05g02766 634 ProSiteProfiles Protein kinase domain profile. 324 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02766 634 Gene3D Transferase(Phosphotransferase) domain 1 401 615 - -
Tsu05g02766 634 SMART serkin_6 324 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02766 634 Pfam Protein kinase domain 325 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02766 634 Pfam Legume lectin domain 10 251 IPR001220 GO:0030246
Tsu05g02766 634 SUPERFAMILY Protein kinase-like (PK-like) 309 612 IPR011009 -
Tsu05g02766 634 CDD lectin_legume_LecRK_Arcelin_ConA 10 243 IPR001220 GO:0030246
Tsu05g02766 634 PANTHER - 7 629 - -
Tsu05g02766 634 Gene3D Phosphorylase Kinase; domain 1 309 400 - -
Tsu05g02766 634 ProSitePatterns Protein kinases ATP-binding region signature. 330 354 IPR017441 GO:0005524
Tsu05g02766 634 SUPERFAMILY Concanavalin A-like lectins/glucanases 9 250 IPR013320 -
Tsu05g02766 634 CDD STKc_IRAK 330 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02766 Tsu-Chr5 37742934 37744838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02766 9 613 Receptor kinase-like Gene Family AT5G10530 56.281 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu05g02766 Pkinase 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02766 - - mtr:MTR_8g067690 920.613