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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Tsu05g02764
ATGAAGGCTCGCCGGGGAAGGTGTGTCCGGCCATCGGCTCCGGAGAAAGAATGGAAACATTTTATGAAAGCCATACTTCCTTCACCCATTCATGCCAAACAAATTAGAATTCCAGATGAGTTTATAACAAGATTTGGGAATGAACTCAAGAATGTTGCTATAATTACTGTTCCAGATGGTCGTGTTTGGGAAATGGAAATGAAGAAATGCGGCGAACATGTTTTCTTTTGCAACAAATGGCAAGAGTTCGTAGAGTACTATTCTATAGGATATGGTTGCTATCTATCTTTCAAATATGAAGGGAATTCAAAGTTTAGTGTTATTATATTTGATGCAACTTCTGTTGAAATTTGCTATCCTTTCAAAACTCTGAGTACTAATGGAGAACAAAACCCGAAGTATTCTAGTCCTAGGAAACGGTCCAAGGTTGAAACAAGTGAGAGTCATGGGAAAAAGGTCAAAATAATGTCTAAAGATGCTTCTAAAAGAGCAGAGGATGCCGCCAATGAATTCAAACCAAAAAATCCATATTTTTGTTCCAAAATCGCTAAGGGAAAATGTGTGTATGTTATTTCTGATTTTGCTCTCAAGTATCTGAAGCTAAATGTTCCTATAAAACTCCAAAATTCTCATGGGGAGCATTGGGAAGTTTTTTGCCTAGTGCATAAGTCCAGATCATCAACAATGCGAATATCGAAAGGATTTTCTAAATTTCAACGGAACAACAACCTGTCACATGGAGATTATTGTGTGTTTGAACTGATCAAGAAGAAGCCTGTTGTGCTAAAAGTCACGATGTTTCGTGCGGTTGATTATCACGATTAA
825
0.3758
MKARRGRCVRPSAPEKEWKHFMKAILPSPIHAKQIRIPDEFITRFGNELKNVAIITVPDGRVWEMEMKKCGEHVFFCNKWQEFVEYYSIGYGCYLSFKYEGNSKFSVIIFDATSVEICYPFKTLSTNGEQNPKYSSPRKRSKVETSESHGKKVKIMSKDASKRAEDAANEFKPKNPYFCSKIAKGKCVYVISDFALKYLKLNVPIKLQNSHGEHWEVFCLVHKSRSSTMRISKGFSKFQRNNNLSHGDYCVFELIKKKPVVLKVTMFRAVDYHD
274
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Tsu05g02764
274
CDD
B3_DNA
180
268
IPR003340
GO:0003677
Tsu05g02764
274
SMART
B3_2
21
113
IPR003340
GO:0003677
Tsu05g02764
274
SMART
B3_2
178
270
IPR003340
GO:0003677
Tsu05g02764
274
SUPERFAMILY
DNA-binding pseudobarrel domain
171
268
IPR015300
-
Tsu05g02764
274
PANTHER
B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR VRN1
16
142
-
-
Tsu05g02764
274
PANTHER
B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR VRN1
142
269
-
-
Tsu05g02764
274
Pfam
B3 DNA binding domain
185
269
IPR003340
GO:0003677
Tsu05g02764
274
Pfam
B3 DNA binding domain
21
112
IPR003340
GO:0003677
Tsu05g02764
274
SUPERFAMILY
DNA-binding pseudobarrel domain
16
112
IPR015300
-
Tsu05g02764
274
Gene3D
-
155
273
IPR015300
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Tsu05g02764
Tsu-Chr5
37717958
37729851
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Tsu05g02764
132
271
B3 DNA Binding Superfamily
AT3G18990
37.671
2.26e-18
82.0
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
B3
Tsu05g02764
B3
4.3e-11
CL0405
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Tsu05g02764
-
-
mtr:MTR_5g070440
426.017
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