Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02762 ATGTTCTCAGCTACTAGAACCATAGCTCTACACTCATCTTCACTATCCACAGTCTCTTCTAGTTCTGataaaccatcatcatcatcatcatcaactccAACCCATTTAACTCCTAAACCCAAAAGTCTTCTCCAAAACCATCCACTTTACACACCAACTCATGAAAAACTATCCCTTCAATTCAAAGAGAAAATTCTATGTCTTGAAGTAATGGGTATTGATTCAGGTAAAGCACTCTCTCAAAATCCTAGTCTTCACACAGCTAGTTTAGAATCCATTCATTCCATTATCACTTTTCTTCTCTCTAAAGGCATACAACATAAAGATCTTCCAAGAATCTTTGGCATGTGTCCTAAGATTCTTACTTCAAACATCAAAACTGATCTTAACCCAGTTTTTGATTTTCTAGTACAAGAGCTTAAAGTACCTGAACATAACTTTAGAAAAGTTATAAAAAAGTGTCCAAGATTTCTTACTTCTAGTGTGAAAGATCAACTTAAACCAGCTTTGTTTTATCTTAATAGATTAGGGTTAAGGGATTTAGAAGCTTTGGCTTATCAAGATTGTGTTTTATTGGTTTCAAATGTTGAAAGGACACTTATTCCTAAACTTAAGCATATGCAAAGTATGGGATTTTCTAAAGAAGAGGTTAGATGTATGGTTTTAAGGTGTCCTGCATTGTTAACTTTTAGTATTGAGAATAATTTTCAGCCAAAATTTGAGTATTTTTCTGTGGAAATGGAGAGGAAATTGGAAGAGTTGAAAGAGTTTCCTCAGTATTTCTCTTTTAGTTTGGAGAATAGGATTAAGGTTAGACATATGGAGATTGTTGAAAATGGGATAAATTTGCCCTTGTCATTGATGCTTAAAAGTACTGATGATGAATTTAGGGAGTTGATAACTAAGGGGGATAATTGA 918 0.3246 MFSATRTIALHSSSLSTVSSSSDKPSSSSSSTPTHLTPKPKSLLQNHPLYTPTHEKLSLQFKEKILCLEVMGIDSGKALSQNPSLHTASLESIHSIITFLLSKGIQHKDLPRIFGMCPKILTSNIKTDLNPVFDFLVQELKVPEHNFRKVIKKCPRFLTSSVKDQLKPALFYLNRLGLRDLEALAYQDCVLLVSNVERTLIPKLKHMQSMGFSKEEVRCMVLRCPALLTFSIENNFQPKFEYFSVEMERKLEELKEFPQYFSFSLENRIKVRHMEIVENGINLPLSLMLKSTDDEFRELITKGDN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02762 305 MobiDBLite consensus disorder prediction 16 47 - -
Tsu05g02762 305 PANTHER CGI-12 PROTEIN-RELATED 20 302 IPR003690 GO:0003690|GO:0006355
Tsu05g02762 305 Gene3D Transcription termination factor 3, mitochondrial 42 183 IPR038538 -
Tsu05g02762 305 Gene3D Transcription termination factor 3, mitochondrial 184 303 IPR038538 -
Tsu05g02762 305 Pfam mTERF 149 296 IPR003690 GO:0003690|GO:0006355
Tsu05g02762 305 Pfam mTERF 68 180 IPR003690 GO:0003690|GO:0006355
Tsu05g02762 305 SMART mt_12 111 143 IPR003690 GO:0003690|GO:0006355
Tsu05g02762 305 SMART mt_12 218 250 IPR003690 GO:0003690|GO:0006355
Tsu05g02762 305 SMART mt_12 76 106 IPR003690 GO:0003690|GO:0006355
Tsu05g02762 305 SMART mt_12 251 282 IPR003690 GO:0003690|GO:0006355
Tsu05g02762 305 SMART mt_12 182 213 IPR003690 GO:0003690|GO:0006355
Tsu05g02762 305 SMART mt_12 148 179 IPR003690 GO:0003690|GO:0006355
Tsu05g02762 305 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 20 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02762 Tsu-Chr5 37703911 37705876 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu05g02762 mTERF 6.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02762 K15032 - gmx:100788221 437.187