Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02758 atGAGCTTTTTTTCAGATTCTACATCAAGACCATTTAGCACCATGAATGAAGATATGGAGAATAATGTAGAGACACAAGAAAACATTTCATCAAGTTCAATTGTGAGAAAGAAATCAGATATAGTTTTGGTGACAAATAATAATGTTCGGTTTCAAATAGTTAGAAATGTTATGACAAATATGAAAGAGGTGATGTTGGGTACTAAGCTTGTTGTGCTTTTTCCTGCTGTTCCTTTAGCTGTTGCTGCTGATTTTTATAGCCTTGGAAGGCCTTGGATTTTTGCTTTGAGCTTGCTTGGACTTGCTCCCCTAGCTGAACGTGTCAGCTTCCTCACTGAGCAAATTGCATATTTCACCGGCCCAACAGTTGGAGGGCTTCTAAATGCAACTTGTGGAAATGCAACTGAAATGATAATAGCAATATTAGCACTTCATCAGAACAAAATACATGTTGTGAAGTTCTCCCTGCTTGGTTCCATTCTCTCGAACCTTCTATTGGTTCTAGGCAGCTCACTCCTTTGTGGTGGCTTAGCAAACCTTAAGAGGGAGCAAAGATATGACAGAAAACAAGCAGATGTGAATTCATTGCTTTTGTTGCTGGGATTGCTATGTCATTTGCTGCCTTTAATGTTCAAATATGCCTTGGCTGGGGGAAATCATTCAATTGCCACTTCTACTCTTCAATTGTCAAGAGCAAGCAGTGTTGTTATGCTTCTAGCATATGTTGCATATATCTTCTTCCAATTGAAAACTCATCGAAAAATATTTGATGCACAAGAGGTGGAAGGTGAAGATGATGAAAAAGCAGTGATAGGATTTTGGAGTGCATTTAGTTGGTTGGTGGGTATGACATTGGTCATATCTGTGCTTTCTGAATATGTTGTGGGAACCATTGagGCTGCTTCAGAATCTTGGGGAATTTCTGTTAGCTTCATTAGcataattttgctaccaattgTTGGGAATGCTGCAGAACATGCTGGTTCAATCATATTTGCTTACAAGAACAAATTGGACATATCTTTAGGTGTTGCTATGGGATCTGCTACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGATTGTTGCATGGATAATGGGTATAAGAATGGATTTGGACTTCAACCTTCTTGAAACTGGATGTCTTGGTTTTGCAATTATTGTTACAGCCTTCACTTTACAGGATGGAACTTCACACTATATGAAAGGAGTGATTCTTACTCTCTGTTACATTGTTATTTCTGCATGTTTTTTCGTTCTCAAATCTCCACAAATCAACCAATATGGTATCGCCATGCTTTGA 1305 0.3762 MSFFSDSTSRPFSTMNEDMENNVETQENISSSSIVRKKSDIVLVTNNNVRFQIVRNVMTNMKEVMLGTKLVVLFPAVPLAVAADFYSLGRPWIFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIAILALHQNKIHVVKFSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLMFKYALAGGNHSIATSTLQLSRASSVVMLLAYVAYIFFQLKTHRKIFDAQEVEGEDDEKAVIGFWSAFSWLVGMTLVISVLSEYVVGTIEAASESWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGIRMDLDFNLLETGCLGFAIIVTAFTLQDGTSHYMKGVILTLCYIVISACFFVLKSPQINQYGIAML 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02758 434 TIGRFAM cax: calcium/proton exchanger 75 419 IPR004798 GO:0006816|GO:0015369
Tsu05g02758 434 MobiDBLite consensus disorder prediction 1 27 - -
Tsu05g02758 434 Pfam Sodium/calcium exchanger protein 92 249 IPR004837 GO:0016021|GO:0055085
Tsu05g02758 434 Pfam Sodium/calcium exchanger protein 276 416 IPR004837 GO:0016021|GO:0055085
Tsu05g02758 434 TIGRFAM caca2: calcium/proton exchanger 56 419 - -
Tsu05g02758 434 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 18 429 IPR004713 GO:0006812|GO:0008324|GO:0016021
Tsu05g02758 434 Gene3D - 121 264 IPR044880 -
Tsu05g02758 434 Gene3D - 266 419 IPR044880 -
Tsu05g02758 434 PANTHER VACUOLAR CATION/PROTON EXCHANGER 18 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02758 Tsu-Chr5 37654818 37661149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02758 24 425 Antiporters AT2G38170 66.504 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02758 K07300 - gmx:100816844 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02758 05 37654818 37661149 Tsu05g02758 05 37654818 37661149 ECH