Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02757 ATGAAGGCATCCTCTGTAGGCGGTAAAAAGCACAGTGTGAACACTGATTACATTTTGAAGGTTCTTGGTCTCGATATATGTTCAGATACAATAGTTGGTAATGATATGGTCAGGGGAGTCTCTGGGGGCCAAAGAAAAAGAGTTACGACAGGAGAAATGATCATTGGTCCTCGAAAAACACTATTCATGGACGAAATATCAACTGGGCTTGATAGCTCTACTACTTATCAGATAGTGAAATGCATAAAGAATTTTGTTCACCAGATGGAGGCTACTGTTCTCATGGCACTACTTCAGCCAGCTCCTGAAACATTTGAGCTATTTGATGATTTAGTGCTTCTGTCGGAAGGGCATATTATATATGAAGGCCCTCGAGAAGACGTGCTTGAATTTTTTGAGTCAATAGGTTTTCAACTTCCACCGCGCAAGGGGATCGCAGACTTCCTGCAGGAGGTCACCTCTAAAAAGGATCAAGCACAATACTGGTCTGATCCTTCTAAACCATATCAATTTATCACAGTTCGAGAGATTGCAGAAGCCTTTAGAAATTCTAGATTTGGAAGGTATATGGACTCCTTACAGGCTGAACCATATGATAAATCAAAGTGCCATCCTTCAGCTTtggctaaaaaaaaatatgctgtGTCAAAATTGGAGGTCACAAAAGCTTGCTTTAACCGAGAAATACTTTTGATCAAAAGGCATAGTTTCCTTTATATCTTTAGAACCTTCCAGGTTGCTTTTGTTGGATTCGTCACATGTACAGTATTCTTGCGAACAAGGCTGCATCCTACAGATGAGGTTTACGGGAACCTTTATCTTTCTGCTCTATTTTTCGGACTTGTTCACATGATGTTTAATGGGTTTTCAGAGCTGCCTTTGATGATAAGCAGGCTCCCAATATTTTACAAGCAAAGAGATAATCTATTTTATCCTGCATGGGCGTGGTCTTTTACCAGTTGGATTCTCCGTGTACCTTACTCTGTTATTGAGGCTTTTATATGGACTACTGTTGTATATTACACTGTTGGATTTGCCCCTGCAGCGGGAAGGTTTTTTCGCTACATGTTTATACTTTTTGTAGTGCACCAAATGGCATTAGGTCTTTTCGGGATGATGGCTTCTATTGCACGAGATATGGTTCTTGCCAATACATTTGGCTCAGCTGCACTGCTGGTCATATTCTTGATGGGAGGATTTATCGTTCCTAAAGGAATGGTTAAGCCATGGTGGATTTGGGGCTACTGGTTGTCACCCCTTACATATGGACAACGTGCGATTACAGTTAACGAGTTTACTGCTACCAGATGGATGAAGAAATCAGCAATTGGGAACAGCACAATTGGTTACAACATCCTCAATTCACACAACATACCGACTGATGATTACTGGTATTGGGCTGGTGCTGGAATTTTAATGCTCTATGCAGTTTTTTTCAATACCATGGTCACTTTGGCCTTGGCCTATCTGAATCCACATCAAAAGGCACGCACAGTTATTCCTCTTGATGATGGCTCGGGAAAGAATTCATCGGGTGATGTTAGTATTCAGGTCTATGAAATGAATACCAATTCCAGGTCTACAAGAGACAACAGTAATACGAAGGGAATGATTCTTCCATTTCAACCATTGACAATGACGTTCCATAATGTCAATTATTATGTTGATATGCCAAAGGAAATAAGAAAGCAAGGCATACCTGAAACAAAGTTGCAACTCTTATCAGATGTGAGCGGAGTTTTCTCACCGGGTGTCCTTACAGCATTAGTGGGGTCTAGTGGGGCTGGTAAAACCACACTGATGGATGTACTTGCTGGCAGGAAAACTGGAGGGTATATCGAAGGGAACATCAAAATATCTGGTTATCCAAAAGAGCAACGGACATTTGCCAGAATATCGGGATATGTTGAACAAAATGATATACACTCTCCTCAAGTTACAATTGAGGAGTCACTGTGGTTTTCTGCATCTCTTCGCCTTCCAAAGGATATCAGCATTGATAAAAGACGTGAATTTGTTGAACAAGTAATGAAACTAGTTGAGCTTGACTCTTtgagacatgctttggttggtCTGCCAGGTAGTTCTGGCTTATCAACAGAGCAGAGAAAGAGATTAACAATTGCAGTGGAGCTTGTAGCAAATCCTTCCATTATTTTTATGGACGAGCCTACATCTGGACTTGATGCACGTGCAGCAGCTATTGTTATGCGAACTGTTCGCAACACTGTTGATACTGGAAGAACTGTAGTTTGCACCATACATCAACCAagtattgatatttttgaagcaTTTGATGAATTACTTCTTATGAAGCGTGGGGGACGAGTTATTTATGGGGGAAAGCTTGGTGTACAGTCACAGATAATGATAGACTATTTTCAGGGAATCAATGGTATCCCCCCTATTCCAACTGGCTACAATCCAGCTACCTGGGTTCTTGAGGTCACTACAGCTTCTGTTGAAGAGAGAATTAATTCAGATTTTGCAGATATTTACAAGAATTCAGCACAATTCAGGGGAGTGGAGGCTTCTATTTTGGAATTTGAGCATCCTCCTGCAGGATCCCAACCACTAAAGTTTGACACAATGTATTCACAAAATCTGCTGTCTCAATTTTTTCTATGCTTATGGAAACAAAATCTTGTGTACTGGAGAAGCCCATCATATAACGCCATGAGGCTATACTTCACCACAATCAGTGCTTTGATATTTGGTAGTGTATTTTGGGATATTGGTACAAAAAGAGCTACAACTCAAGAGCTGTTTGTACTTATGGGAGCTCTTTATTCCGCATGCTTGTTTCTTGGGGTAAACAATGCTTCTTCTGTACAGCCGATTGTTTCAATAGAAAGGACCGTATTTTATAGAGAGAAAGCAGCAGGAATGTACTCTCCGTTGGCATATGGAGCAGCTCAGGGGCTTGTAGAACTACCATACATTGCTTTTCAGACAATAGTGTTTGGCATAATAACATATTCTATGGTCAATTTTGAGAGGACAGCCGAGAAGTTTTTCCTCTATCTATTGTTCTTGTTCCTAACCTTTACCTACTTCACATTTTACGGAATGATGGCTGTTGGTCTTACACCTTCCCAACAGTTAGCTGCTGTTATTTCTTCAGCATTTTACTCCCTGTGGAATCTTCTTTCCGGTTTTCTTATCCCCAGAGTGAATATTCCTGGATGGTGGCTTTGGTTCTATTATATCTGCCCTGTTCAATGGACATTACGTGGTATTATCACATCTCAGCTTGGTGATGTGGAAACAAAAATTGTGGGACCAGGATTTGAAGGCACTGTGAAAGAGTATTTAGCTGTAAGTCTTGGATATGATGAAAAAATCAACGGAATTTCGTCGGTCGGTGTTTCGGTGACAGTCCTTATTGCATTTATTGTCCTGTTCTTTGGTAGTTTTGCCGCATCGGTCAGATTTTTGAatttccagaagagataa 3456 0.3993 MKASSVGGKKHSVNTDYILKVLGLDICSDTIVGNDMVRGVSGGQRKRVTTGEMIIGPRKTLFMDEISTGLDSSTTYQIVKCIKNFVHQMEATVLMALLQPAPETFELFDDLVLLSEGHIIYEGPREDVLEFFESIGFQLPPRKGIADFLQEVTSKKDQAQYWSDPSKPYQFITVREIAEAFRNSRFGRYMDSLQAEPYDKSKCHPSALAKKKYAVSKLEVTKACFNREILLIKRHSFLYIFRTFQVAFVGFVTCTVFLRTRLHPTDEVYGNLYLSALFFGLVHMMFNGFSELPLMISRLPIFYKQRDNLFYPAWAWSFTSWILRVPYSVIEAFIWTTVVYYTVGFAPAAGRFFRYMFILFVVHQMALGLFGMMASIARDMVLANTFGSAALLVIFLMGGFIVPKGMVKPWWIWGYWLSPLTYGQRAITVNEFTATRWMKKSAIGNSTIGYNILNSHNIPTDDYWYWAGAGILMLYAVFFNTMVTLALAYLNPHQKARTVIPLDDGSGKNSSGDVSIQVYEMNTNSRSTRDNSNTKGMILPFQPLTMTFHNVNYYVDMPKEIRKQGIPETKLQLLSDVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGNIKISGYPKEQRTFARISGYVEQNDIHSPQVTIEESLWFSASLRLPKDISIDKRREFVEQVMKLVELDSLRHALVGLPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLGVQSQIMIDYFQGINGIPPIPTGYNPATWVLEVTTASVEERINSDFADIYKNSAQFRGVEASILEFEHPPAGSQPLKFDTMYSQNLLSQFFLCLWKQNLVYWRSPSYNAMRLYFTTISALIFGSVFWDIGTKRATTQELFVLMGALYSACLFLGVNNASSVQPIVSIERTVFYREKAAGMYSPLAYGAAQGLVELPYIAFQTIVFGIITYSMVNFERTAEKFFLYLLFLFLTFTYFTFYGMMAVGLTPSQQLAAVISSAFYSLWNLLSGFLIPRVNIPGWWLWFYYICPVQWTLRGIITSQLGDVETKIVGPGFEGTVKEYLAVSLGYDEKINGISSVGVSVTVLIAFIVLFFGSFAASVRFLNFQKR 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02757 1151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 149 IPR027417 -
Tsu05g02757 1151 SMART AAA_5 583 775 IPR003593 -
Tsu05g02757 1151 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 546 798 IPR003439 GO:0005524
Tsu05g02757 1151 Pfam Plant PDR ABC transporter associated 437 500 IPR013581 -
Tsu05g02757 1151 Gene3D - 2 135 IPR027417 -
Tsu05g02757 1151 Gene3D - 559 789 IPR027417 -
Tsu05g02757 1151 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 1151 - -
Tsu05g02757 1151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 570 782 IPR027417 -
Tsu05g02757 1151 CDD ABCG_PDR_domain2 543 781 IPR034003 -
Tsu05g02757 1151 Pfam ABC transporter 574 726 IPR003439 GO:0005524
Tsu05g02757 1151 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 1151 - -
Tsu05g02757 1151 Pfam ABC-2 type transporter 755 825 IPR043926 GO:0140359
Tsu05g02757 1151 Pfam ABC-2 type transporter 99 149 IPR043926 GO:0140359
Tsu05g02757 1151 Pfam ABC-2 type transporter 872 1084 IPR013525 GO:0016020|GO:0140359
Tsu05g02757 1151 Pfam ABC-2 type transporter 221 432 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02757 Tsu-Chr5 37646147 37654739 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02757 K08711 - gmx:100816324 1995.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02757 05 37646147 37654739 Tsu05g02757 05 37646147 37654739 ECH
Tsu03g00898 03 8270069 8278811 Tsu05g02757 05 37646147 37654739 PCT