Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02737 ATGGCAGATTTCTTCGCCGGAGAGATAGCAACAAAGCTTATAAAAATGCTCGTAAAGATATCTAGAAAAGAGCTGTTATTCAAAACAAGCGCAAACCAACTCATAAGATACATCAATGAAATCCTCCCaacaatacaaaaaatcaaatactcTGGCGTAGAGTTAACGGAACATCAACAGTTTGATCTCGACAGCTTCTTGGATATGCTACATTCCGGCGTGGAACTCTCTTACAAAGTCCTCTCCTCAAGCAGGTGGAACGTGTACAAGAATTTGCAACTAGCAAAGAAGATGGAAAAACTTGAAAAGAATGTGTCAAGATTCTTGCAGGGTCCTATGCTGGCACATATGTTGGCCGACCTGCTTCACACGCGATTCGAGATGGTTGAAAGGCTCGACCGGGTTGATGCGTCGAATAGGAGGTTGGAGCAGTATTTTGGTGCTATGAAGATTGGTGTAGGAGGTGGTGGGTCGGTTGAGGAAGCTGTAAGGTCTTGTATGGAGGAAGATGAGAATTTGGTTGAGGGTAATACTGGGAATATGAATTTGAGTGTTGGGTTGGATTTAGGGAAGAAGAAAGTTAAGGAGATAGTTATGGGAAGAGAGGATTTGTGGGTTGTTGGTGGATCTGGGAAAACTACTCTTGTTAGAGAGGTTTGTAGAGATGAACAAGTGAAATGTTATTTCAAGGAGAAAAACTTGTTTCTAACTGTTTCGCTATATACTCGTTCAAGCTTCTGTATTGAAGGTGAGTTTGATCGAATTTGTCAGAGTTTAGGACTTTCTGGACCTGAAGATTTTGCAATTCCTGCTGCTGCTTGGGAAGCTATGAAGTTTCGATCGTCTTCGGATATTCTTCTCAGTTTGAAGATTGAGGAGATTAATCTTCAACagaaagatgaagaagatgaattgagTGAGAAATGTGCAGAGAGGGATAGGGATAGTGTTAGGGTTAATGATGAGGTTGCTGAGACTGTTGTTGTTGGTAgtggtggtggttgtggtgATATCAATGGAATTTGTCCACCTATGGTTAAGCTGCCACCCGGGATGAGAGTTCGGGTTGTTGATAACACGTGTTCAACTTGGGACCTTTCGAAGGAATTGGCTTTGGTAGTGGAAGGGGAAGAAGGGATTTTCAACAGGGAAATGGAGGCGAAAGAGAGTGAGGAAGTTGATAGGGTAAGTCCCAAGAGAGAGGTGGAAGATGTGGTGGTGGATAATGTGGCAATGATTACTGAGATTGTTGATGGTCTTTCGAATTTTAGTACTTCAAATGAAGATGATTCTTCTAGCTCTGCCACAGAACCTAGGTCTAATAATGTATCTCCTAACGGGAGAATTAAGCGTGTTATTACCCCTGGATGCTGGCAAAAGGGCGAGTTTTTGGGGGGTGGTTCGTTTGGTTCTGTTTATGAAGGAATTTCTGATGATGGAATCTTTTTTGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGGGATCAGGGAAAACAAAGTGTCTATCAACTGGAGCAGGAAATTGCACTTTTGAGTCGTTTTGAACATGACAATATAGTTCAATACTATGGCACTGAAATGGATGAATCCAAGCTGTATATCTTTATTGAGCTTGTGACCAAAGGTTCTCTTAGAAACCTCTATCAGAGGGACATCAAATGTGCAAATATATTGGTGCACGCAAGTGGATCTGTCAAACTTGCAGATTTTGGGTTAGCAAAGGCAACCAAATTGAATGACGTTAAATCGTGCAAGGGGACAGCATTCTGGATGGCACCTGAGGTTgttaaaggaaaaaacaaaggTTACGGGCTTCCAGCTGATGTTTGGAGTCTGGGATGCACTGTGCTGGAGATGCTAACGGGCGAAATTCCATACTGCAATTTAGAACGTATGCAGGCAATATTTAGAATTGGAAAAGGTGAGCCACCTCCTATTCCTGACACTCTTTCAAGAGATGCAAAGGATTTTATCTTGCAGTGCCTTCAAGTTAATCCCGATGATCGTCCTACTGCTGCTCAACTCTTAAACCATCCATTTCTCCAAAGGCCACTTTCCCAGTCTTCAGCTCCTTACATTCATGGCAGAAGGGTTCTTGAACAGCTTGTGTGTAGAATACCAGGTTGCAAGTTTGTTGTGGTTTCTAGGTTCAAATTCCCAACAATATTCAATGCAACTTATGAGGTTGAATTGTTGAGTGAAGAGGATGCTTTGTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATCTCTTTTACAGCTAATGAGAATTTGGTCAAACAGGTTGTGAGTGAATGTGAAAAGCTTCCATTGGTTCTTAAAGTTATTGGAGCTTGGAGCTTCATTAAGAGATCAGACATAAATGTTTTGGGCAAGTGTTAA 2385 0.4038 MADFFAGEIATKLIKMLVKISRKELLFKTSANQLIRYINEILPTIQKIKYSGVELTEHQQFDLDSFLDMLHSGVELSYKVLSSSRWNVYKNLQLAKKMEKLEKNVSRFLQGPMLAHMLADLLHTRFEMVERLDRVDASNRRLEQYFGAMKIGVGGGGSVEEAVRSCMEEDENLVEGNTGNMNLSVGLDLGKKKVKEIVMGREDLWVVGGSGKTTLVREVCRDEQVKCYFKEKNLFLTVSLYTRSSFCIEGEFDRICQSLGLSGPEDFAIPAAAWEAMKFRSSSDILLSLKIEEINLQQKDEEDELSEKCAERDRDSVRVNDEVAETVVVGSGGGCGDINGICPPMVKLPPGMRVRVVDNTCSTWDLSKELALVVEGEEGIFNREMEAKESEEVDRVSPKREVEDVVVDNVAMITEIVDGLSNFSTSNEDDSSSSATEPRSNNVSPNGRIKRVITPGCWQKGEFLGGGSFGSVYEGISDDGIFFAVKEVSLLDQGDQGKQSVYQLEQEIALLSRFEHDNIVQYYGTEMDESKLYIFIELVTKGSLRNLYQRDIKCANILVHASGSVKLADFGLAKATKLNDVKSCKGTAFWMAPEVVKGKNKGYGLPADVWSLGCTVLEMLTGEIPYCNLERMQAIFRIGKGEPPPIPDTLSRDAKDFILQCLQVNPDDRPTAAQLLNHPFLQRPLSQSSAPYIHGRRVLEQLVCRIPGCKFVVVSRFKFPTIFNATYEVELLSEEDALSLFCHHAFGQKSISFTANENLVKQVVSECEKLPLVLKVIGAWSFIKRSDINVLGKC 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02737 794 SMART serkin_6 458 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02737 794 ProSiteProfiles Protein kinase domain profile. 458 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02737 794 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 248 550 - -
Tsu05g02737 794 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 545 693 - -
Tsu05g02737 794 Pfam Protein kinase domain 548 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02737 794 Coils Coil 291 311 - -
Tsu05g02737 794 Gene3D - 187 334 IPR027417 -
Tsu05g02737 794 Gene3D - 731 784 IPR042197 -
Tsu05g02737 794 ProSiteProfiles RPW8 domain profile. 1 147 IPR008808 -
Tsu05g02737 794 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 248 550 - -
Tsu05g02737 794 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 545 693 - -
Tsu05g02737 794 Gene3D Phosphorylase Kinase; domain 1 451 539 - -
Tsu05g02737 794 MobiDBLite consensus disorder prediction 422 447 - -
Tsu05g02737 794 SUPERFAMILY Protein kinase-like (PK-like) 456 691 IPR011009 -
Tsu05g02737 794 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 7 131 IPR008808 -
Tsu05g02737 794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 696 783 IPR027417 -
Tsu05g02737 794 Pfam NB-ARC domain 725 780 IPR002182 GO:0043531
Tsu05g02737 794 ProSitePatterns Protein kinases ATP-binding region signature. 464 486 IPR017441 GO:0005524
Tsu05g02737 794 Gene3D Transferase(Phosphotransferase) domain 1 541 698 - -
Tsu05g02737 794 Pfam Protein tyrosine and serine/threonine kinase 461 547 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02737 Tsu-Chr5 37405198 37408757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02737 237 685 MAP Kinase Kinase Kinase AT4G08500 44.037 1.25e-120 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tsu05g02737 Pkinase 5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02737 K13414 - gmx:100819999 613.994