Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02731 ATGGGTTTCAATACAAAGGACATTCAACTTCATGTGTCCAAAGTTCTTCATATTTCAATTGGAAAAAGCTATACTTTTATGAAAAAGTATCCAAAGGTTTCATGTGCTTTGTTAGTCTTCTTAATTGTGTATATATTTCTTTCTTGTATATAcaatttgttggtttttttgtcTCCATTTCTTGTATTAATTGCAATTCTGGTTAAAATCTTTTGGAGCTCCGAGCAAACGAATGTTAAAGGTGTTGAGAAAAAGGGAGATAAAAAAAAGGTTGAAGTGAAACTACCCGAGGTTCACAAGAATGAGAGACGTGGAATGCTTTATAAGTATCCATCACAAAATGCAACAAGTAGACGAAGAAATTTCACCGGGAAGAAATTGGATGTGTATGGTGATTTAGAACAAAAAGCTAAGAATTTATCAGCAGCATTTCGAAATGAGTTTACTAAAAAGAACACAGAGATTATATCAGGATTTAGAGTTTTCGAGAAAGAGATTGACCGTTATGATTATAAGTTTCCGTCAAGAAAATGTGAAGCTCCTAAAGAGCAATTACTTTGTGAGCCTTCAAAAGATGAACTTGTAACTTGTGGTACAAGTTATTATGATGGTCAAGagaaaaagatagaaaaaatgGAAGATGAGAAAAAGGCAATAGAGGATAATGTTATTAGTAATAAAGTTATAGAATTGAAAGAGGATGGTCAACAAAAGTTAATGGATCTTGGAATTTGTGAGATTGAAAGTAATAAAAGGTTGGAGAGTCTTATAGCTAGAAGAAGAGCAAGAAAACAATTGACTTTGGAGATTGAGAATGATTTAATTGAAACAGAATCAATTACACCAAGCCAAATTGCACCATTGCTTATTGCAGCAAGAATGAACCCTTTTGATTCTCCAAGAGCTTATGATGGCATAGAAATGCCTGGTTCTGCTCCATCTGCTTTGAGAAGTCCATTTGATATTCCTTATGAACCTTTTGAGGAGAAACCAAATCTCAAAGGGGATGGTTTTGATCATGACTTCATAGGTGCCATGCCATTAGAACCTAAACAAGACCTTGAAAGGATACCAAATTCAAGACTTAGCAGGCTTTCAGGTTTGGAAAGTCATGATAAGCTTGAAAAATTAAACTCCATAGAAGGGAGTGAAAGTGAACTACAAGCTCCAAATCCATCAAATGGAGAGGAAACCATACAAGAAGAGGAAGTGAAATGTAAAGTTGATATGTTTGGCATGAAAATTGAGGAAGGAGACGACGTTGATACAAAAAACTCCATGTCGTATCATGAAAGCGAACCAAACTTAATTCCAGCAGTAACAAATGTTGAAAGATTTTCAACTTTACCTCCTAAGCCTCAAGATGTTATCCATGATTTTCCAATATCTAGTACTAATGTTACTAGTTTAAATGATTCATTGTATGAGTCTCTTTCAATTCCTATTGATAAGAATAAGGAACACATGTTCTTTACAAATAGACTAATTCGTCATACACCGTCGATATCCTTAGCTTCTGATTTACAAGTTGAGTTTTCTGAAATTGGTTCACCAACATTAACAATTGATGAGAATCATGAAGATTTGTGGGAATCGAATGAAGTTAGTGATCATGATGATATTTTAGAGGAAAACACTGATGTAGAAAATGCAGATGATGTGAATTTTATGTCATCAGAATCTAATATACATGTTGATACTCCAACTTATGAAATGAGTAGTGATCATAATTTATTTGGTAATGTGAGACAAACCGGTACATCCCAATATTCTTCGGATGTTTCAACGCGTTGGAAGCGGTTAATAAGGTTGATGGATACTCGTGTTGATCATTTACCACAAGAAATTCTTTCAGAAAATCTCGAGGAATCTAACCAGACAGAGAATTTAATAAACACTGACCAAGTTATGAATGAAGCGAACAACTCAGCAGACACTGAACAAGACAACACAACAGACATAGGGAGCAATGAAGAGCCTCAACTATCACAAGTTCATCATCATCGACAAGGAACGGTTGATGAAGTCTCAACTATCAcaagttcatcatcatcttcctcatcacCAAGGTCTGTATTGCATTCGCCGCGTAAGACAACAGCAGACCAAGAGATGCCTCAAGGTGTTCAACAATCAGATGTGGTGTATGTGACTCAAGAAACAGGAAATGGCGAAGGTCCAGTTGAATCCATGTCTCAAAATATTCAGCCTTCCATGGATGATCCAAATGTTGAATCACATAATGATGACTTGATTCATTCTCAGGATGACACTTATCCCTTGGAGAACTCCATTCAAGAATCAAATATGTCTAGCAACATGAGTAATGCAGAAGTTAGTAATCAAGAAgaccaaaatttaaaaaatgatgagAACAATGAAGACAATTCTACTCTTCAAAGTAGACAGGATGCATCATCAGAACCACATAATGATCCAAATGTTGAATCACATAATGATTACTTGATTCATTCACAGGATGACACTTATCCGTCGGAGAACTCCATTCAAGAATCAAGTATGTACAGCAACATGAATGATGCAGAAATTTGTAATCAAGAAGACCAAAATTTAAAGTATGGTGAGAACAATGAAGACAATTCTACTCCTCAAAGTAGACAAGAGCAGGAACAGGAACTTGATGCTTCATTCGAACCAAATAGACTAGCAGAGGTGCCAATGGTTTCTCCGATGCTAGAATCATCCTCAGAAATTCACATAGAGAATAATGAAGGAAAATCCCAAGAATCATTGATACAAGAGGCTAGCACACAACCTTTTACCAATGATGATGTAGTAGACACAAGTTCTGGTAATGATTTTGAAGGGAAAAACCGCAATGActtgaatgaaaatgaaaccaaaattcATAGCTCAGAAGAAGAGAACTATTTGAAAACTGTGTCAAAGCAGGTAGTAGAAGATCATATAGAAAAACAAGAGTCGGAAAAAGGTGACACCTCTGAAGACAAAGGTAATATCGTCTCCGAAGATTCTCCACTACCAATGGTCATTGAAGTATCCACTAATGATGATAACACATTAGGAGAATCTGatgagatgaagaagaatgaaGTCGCCAATAAGGTTAGCAACATAGCACACATGAATGATCCTGAAGGAAGTACTTCAACTTGA 3138 0.3438 MGFNTKDIQLHVSKVLHISIGKSYTFMKKYPKVSCALLVFLIVYIFLSCIYNLLVFLSPFLVLIAILVKIFWSSEQTNVKGVEKKGDKKKVEVKLPEVHKNERRGMLYKYPSQNATSRRRNFTGKKLDVYGDLEQKAKNLSAAFRNEFTKKNTEIISGFRVFEKEIDRYDYKFPSRKCEAPKEQLLCEPSKDELVTCGTSYYDGQEKKIEKMEDEKKAIEDNVISNKVIELKEDGQQKLMDLGICEIESNKRLESLIARRRARKQLTLEIENDLIETESITPSQIAPLLIAARMNPFDSPRAYDGIEMPGSAPSALRSPFDIPYEPFEEKPNLKGDGFDHDFIGAMPLEPKQDLERIPNSRLSRLSGLESHDKLEKLNSIEGSESELQAPNPSNGEETIQEEEVKCKVDMFGMKIEEGDDVDTKNSMSYHESEPNLIPAVTNVERFSTLPPKPQDVIHDFPISSTNVTSLNDSLYESLSIPIDKNKEHMFFTNRLIRHTPSISLASDLQVEFSEIGSPTLTIDENHEDLWESNEVSDHDDILEENTDVENADDVNFMSSESNIHVDTPTYEMSSDHNLFGNVRQTGTSQYSSDVSTRWKRLIRLMDTRVDHLPQEILSENLEESNQTENLINTDQVMNEANNSADTEQDNTTDIGSNEEPQLSQVHHHRQGTVDEVSTITSSSSSSSSPRSVLHSPRKTTADQEMPQGVQQSDVVYVTQETGNGEGPVESMSQNIQPSMDDPNVESHNDDLIHSQDDTYPLENSIQESNMSSNMSNAEVSNQEDQNLKNDENNEDNSTLQSRQDASSEPHNDPNVESHNDYLIHSQDDTYPSENSIQESSMYSNMNDAEICNQEDQNLKYGENNEDNSTPQSRQEQEQELDASFEPNRLAEVPMVSPMLESSSEIHIENNEGKSQESLIQEASTQPFTNDDVVDTSSGNDFEGKNRNDLNENETKIHSSEEENYLKTVSKQVVEDHIEKQESEKGDTSEDKGNIVSEDSPLPMVIEVSTNDDNTLGESDEMKKNEVANKVSNIAHMNDPEGSTST 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02731 1045 PANTHER DENTIN SIALOPHOSPHOPROTEIN 1 550 - -
Tsu05g02731 1045 Coils Coil 202 222 - -
Tsu05g02731 1045 MobiDBLite consensus disorder prediction 859 877 - -
Tsu05g02731 1045 MobiDBLite consensus disorder prediction 769 783 - -
Tsu05g02731 1045 PANTHER CARDIOMYOPATHY-ASSOCIATED PROTEIN 1 550 - -
Tsu05g02731 1045 MobiDBLite consensus disorder prediction 642 756 - -
Tsu05g02731 1045 MobiDBLite consensus disorder prediction 912 943 - -
Tsu05g02731 1045 MobiDBLite consensus disorder prediction 859 887 - -
Tsu05g02731 1045 MobiDBLite consensus disorder prediction 911 1045 - -
Tsu05g02731 1045 MobiDBLite consensus disorder prediction 381 397 - -
Tsu05g02731 1045 PANTHER CARDIOMYOPATHY-ASSOCIATED PROTEIN 565 1040 - -
Tsu05g02731 1045 MobiDBLite consensus disorder prediction 944 993 - -
Tsu05g02731 1045 MobiDBLite consensus disorder prediction 642 661 - -
Tsu05g02731 1045 MobiDBLite consensus disorder prediction 769 819 - -
Tsu05g02731 1045 MobiDBLite consensus disorder prediction 674 742 - -
Tsu05g02731 1045 MobiDBLite consensus disorder prediction 379 399 - -
Tsu05g02731 1045 MobiDBLite consensus disorder prediction 329 358 - -
Tsu05g02731 1045 PANTHER DENTIN SIALOPHOSPHOPROTEIN 565 1040 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02731 Tsu-Chr5 37346189 37352202 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02731 - - cam:101495508 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01011 03 9372283 9375526 Tsu05g02731 05 37346189 37352202 PCT