Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02728 ATGGTTGAGGCTTTGCTTGAAGTTGTATTTGAGAATTTGGTTTCTCTGCTTCGTAATGAATTTTCCACCATTTATAGAATCAAGTCTAAGGCTCAAAATCTTTCAAATATCTTAGAACTCATCAACGCTGTTCTTGAAGACGCTGAGCAAAAACAAGTCAAAGACAGCTCTATTAAGTTATGGCTACAACAGCTCAAAGACGCAGTTTATGTGCTCGATGATATGCTTGACGAATGTTCCATTCAATCCAATCGACTTAAGGGTGCATCCTCTTTAAAACCAAAGAACATTATGTTTCGTTACAACATTGGCAATAAGTTCAAAGAGATAACAAAGAGATTTGATCAAATTGCTGAAAGTAAGAACAAGTTTGTTCTACGAGTGGGTGTTAATGTTAGAGAATGGCCAATTGAAGTGGCTGAATGGCGCCAAACTAGTTCGACTATTGCTGGACCGGAAGTGTATGGACGAGAAGATGATAAAGAGAAGATTGTTGAGTTTCTTCTCACCCAAGTAAGGGACTTTGACTTCCTTTCCGTCTATCCAATTGTCGGCTTAGGTGGTGTTGGAAAAACCACACTTGCTCAATTGGTCTACAATGATCATAGGGTGAGTAGTAATTTTCATACAAAAGTTTGGGTTTGTGTTTCCGAGATTTTCTCTGTCAAGAAGATTTTGTGTTCCATTATAGAATCTATAACTAGAGAAAAATGTGATGCCTTGGATTTAGATGTGTTTGAAAGAAAAGTGCAAGAACTCTTGCAAGGTAAAAGATATTTGTTGGTTTTGGATGATGTATGGAATAGAAATCAAGGATTGGAATTTGGATTAAGCCAAGACAAATGGAAGAAGTTGAAATCTGTATTGTCGTGTGGATCCAAAGGTTCTTCCATTTTGGTTTCCACTCGTGATAAGGATGTTGCGGAGATCACGGGAACATGCCAATTTCATCATTTATCTGGTCTATCCGACAACGAATGTTGGTTGTTGTTTAAACAATATGCATTTGGACACGACAAAGGAGAGCAGGAAGAGCTTGAGGCAATAGGCAAGGAGATAGTAAGGAAGTGCGGGGGATTGCCTCTTGCGGCACAAGCATTGGGAGGTCTAATGCGATCAAGGAGTGGAGAAAAGGAATGGCTTGAAATTAAAGATAGTGAGATTTGGACTTTACCTGATGAGAATTCAATTTTGCCAGCATTGAGATTGAGCTACATATATTTAACACCAACCTTGAAGCAGTGTTTCGCTTTTTGTGCTATATTTCCTAAAGATATAGAAATGGTGAAGGAAGATTTGATCCATCTTTGGATGGCTAATGGATTCATTTCATCTAGGAAAAATTTGGAAGTAGAAGAGGTTGGCAATATGGTCTGGAATGAATTGTGCCAAAAGTCATTCTTCCAAGACATCAAGATAAATGATTATTCTGCAGACATTTGTTTCAAAATGCACGATCTTGTCCATGATCTTGCTCAATCAGTTATGGGATCAGAATGTCTGTTTTTAGAAAATGGAGACGTGACTGGTGGTTTGTCAAAGAGCACTCACCATATTAGTTTTAAACCGGCTGGAATGTTATCATTTGATGGGGGTGCGTTCAAAAAAGTTGAATCCTTGAGAACATGGTATCAGTTAAAGTTTTACAGCCCTAAATTTTTTACTTACTTCCCAACCAGTCGTTCTCTTCGGGTTTTATGCACAAGCAGTTTCAAGTTATCATCATGCGGAAGTTTAATACATTTGAGGTATTTGGAGCTTTATGATTTTGATGGTATAGAAACTATTCCTGACTCAATCTATAACTTGCAGAAATtggaaattttgaaattgaaatgttttttaaaaCTGAGTTGTCTACCGAAACACTTGACTCGCTTAAAATATCTCAGACATCTTATCATTCAAAACTGTTTGTCATTGTCTCGTGTGTCTCCTTTCATTGGAAAATTATCTTGCCTAAGAACACTAAGTGTATACATTGTTGGTTTAGAGACAGGACACAACTTAGCAGAGTTACATGATCTAAAGCTGGGAGGAAAACTAAGCATAGAAGGCCTTAAAAATGTTGGCAGTTTATCTGATGCTCAAGATGCAAATTTGATGGGCAAAAAAGACCTCCAAGTATTATGCTTGTCATGGGGAAATAGTGGTGAAACCAAGAGACCTATTATTAGTCCTAAACAAGTACTCGAACTGCTTCAACCTCACTCAAATGTCAAGAGCTTGACAATACGTTTCTATGATGGATTGTGCTTCCCAAGTTGGATTGGAATACTGAGTAGTTTAGTTTCTCTAGTATTTCATTGTTGCACGAACTGCATACGACTTCCACACATAGGTAATCTACCATTTCTGAAAAACCTTGAATTATTTAATATGGATAATCTGCAGTatatggatgatgatgaatctCTCAATGGTGAGGTGAGGGCTTTTCCATCCCTGGAGAAACTCTCATTACATAGATTACCAAACTTTGAGCGATTGTTGAAAGTGGATAGAAACGAAATGTTCCCCCGTCTTTCAAATTTGACCATCAACTGTTGCCCTAAACTTGTATTGCCATGCCTTCCATCTGCTAAATACCTCTCTGTGTTTGGATGTAACAATGAGATATTGTCGTCAATCTCTAGTTTTTGTGGTCTTACAACTCTTCAACTTGATGTAAATGAAGACATCACATCCTTTCGAGAGGGGATGTTGAGAAACATGATTTGTCTTCATACTCTAAAAATAATTGGTTTCACGGAATTGAAGGAATTACCAAATGATCTCTTCAACCCAACTTTGGAGCATCTACAAATATCTTATTGTGGTAAGCTTGAGTCTCTACCAGAGAATATTTGGGAAAGCCTTGGCTCGCTCCGCACTTTGAAGATTGATCTATGTGTAAGATTGAGATCCTTGCCAGAAAGTATTCGACACCTCACTTATCTTGAGGTTCTGCATATTCGTGGTTGCCCGATATTAAAGAAGCGATGCAAGGAGGAAATAGGGGAAGACTGGGACAACATAGCACACATTCCGAATTTAAATATTGATTAG 3048 0.3747 MVEALLEVVFENLVSLLRNEFSTIYRIKSKAQNLSNILELINAVLEDAEQKQVKDSSIKLWLQQLKDAVYVLDDMLDECSIQSNRLKGASSLKPKNIMFRYNIGNKFKEITKRFDQIAESKNKFVLRVGVNVREWPIEVAEWRQTSSTIAGPEVYGREDDKEKIVEFLLTQVRDFDFLSVYPIVGLGGVGKTTLAQLVYNDHRVSSNFHTKVWVCVSEIFSVKKILCSIIESITREKCDALDLDVFERKVQELLQGKRYLLVLDDVWNRNQGLEFGLSQDKWKKLKSVLSCGSKGSSILVSTRDKDVAEITGTCQFHHLSGLSDNECWLLFKQYAFGHDKGEQEELEAIGKEIVRKCGGLPLAAQALGGLMRSRSGEKEWLEIKDSEIWTLPDENSILPALRLSYIYLTPTLKQCFAFCAIFPKDIEMVKEDLIHLWMANGFISSRKNLEVEEVGNMVWNELCQKSFFQDIKINDYSADICFKMHDLVHDLAQSVMGSECLFLENGDVTGGLSKSTHHISFKPAGMLSFDGGAFKKVESLRTWYQLKFYSPKFFTYFPTSRSLRVLCTSSFKLSSCGSLIHLRYLELYDFDGIETIPDSIYNLQKLEILKLKCFLKLSCLPKHLTRLKYLRHLIIQNCLSLSRVSPFIGKLSCLRTLSVYIVGLETGHNLAELHDLKLGGKLSIEGLKNVGSLSDAQDANLMGKKDLQVLCLSWGNSGETKRPIISPKQVLELLQPHSNVKSLTIRFYDGLCFPSWIGILSSLVSLVFHCCTNCIRLPHIGNLPFLKNLELFNMDNLQYMDDDESLNGEVRAFPSLEKLSLHRLPNFERLLKVDRNEMFPRLSNLTINCCPKLVLPCLPSAKYLSVFGCNNEILSSISSFCGLTTLQLDVNEDITSFREGMLRNMICLHTLKIIGFTELKELPNDLFNPTLEHLQISYCGKLESLPENIWESLGSLRTLKIDLCVRLRSLPESIRHLTYLEVLHIRGCPILKKRCKEEIGEDWDNIAHIPNLNID 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02728 1015 PANTHER DISEASE RESISTANCE PROTEIN RP 27 946 IPR044974 GO:0006952
Tsu05g02728 1015 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 419 IPR027417 -
Tsu05g02728 1015 Gene3D - 6 119 - -
Tsu05g02728 1015 Gene3D - 404 495 IPR036388 -
Tsu05g02728 1015 Gene3D - 321 403 IPR042197 -
Tsu05g02728 1015 Gene3D - 141 315 IPR027417 -
Tsu05g02728 1015 SUPERFAMILY L domain-like 469 1007 - -
Tsu05g02728 1015 Coils Coil 31 51 - -
Tsu05g02728 1015 Gene3D Ribonuclease Inhibitor 533 854 IPR032675 -
Tsu05g02728 1015 Pfam NB-ARC domain 157 385 IPR002182 GO:0043531
Tsu05g02728 1015 Gene3D Ribonuclease Inhibitor 855 1002 IPR032675 -
Tsu05g02728 1015 CDD RX-CC_like 3 119 IPR038005 -
Tsu05g02728 1015 Pfam Rx N-terminal domain 6 100 IPR041118 -
Tsu05g02728 1015 PRINTS Disease resistance protein signature 180 195 - -
Tsu05g02728 1015 PRINTS Disease resistance protein signature 253 267 - -
Tsu05g02728 1015 PRINTS Disease resistance protein signature 357 371 - -
Tsu05g02728 1015 PRINTS Disease resistance protein signature 975 991 - -
Tsu05g02728 1015 PANTHER OS05G0414200 PROTEIN 27 946 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02728 Tsu-Chr5 37318361 37321408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02728 183 422 WRKY Transcription Factor Family AT5G45050 26.531 2.84e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02728 - - mtr:MTR_5g071220 1316.98