Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02716 ATGGCTTCTATGAGCCATATTTTCCTCTTATTTTGCTTCTTCAATCTAAAAACACATCTAGTATCATCAGTTTATTCAGCTAGTGATGCTCCAATCAATGTAACCAAACACTTCTCTTTCCTAGATTTCAGCTTCACCAATAACTCAAGATTAGTCCATGATTTGAAGCTTCTAGGAAATGCTAAGTTCTCAAATGAAAAGGGTTCTCTTCAAATCCCAAATGAATCACAAGAAACAGATATAAGACATCAGGCAGGTAGAGGTTTATATTCCTTTCCAATTCGTTTGTTAGATCCAATTACCAAAACACCTGCTTCTTTTCAAACCACCTTTTCTTTTCAGCTTAATAATTTAAGTACTAATTCTGATTTAAGTGATTATGGTGGTGGTAGTGGACTTACTTTTATCATTGTACCTGATGAATTCACTGTTGGAAGGCCGGGACCTTGGCTTGGTATGCTTAATGATGCTTGTGAGAACGATTATAAAGCGGTTGCAATTGAGTTTGATACGCGAAAGAATCCGGAATTTGGTGATCCAAATGATAATCATGTTGGTATCAATTTAGGTAGCATAGTATCTACTAAAATTATCAATGTTTCTGATGTTGGAATTTCACTTAAAGATGGTTTTGTTCACCATGCTTGGATCAATTATGACGGTCCACGAAGGAGAATTGACATTCGTTTAGGACTTGCGAACGAAGATGTTTATCCTGTCAAGCCTATCTTCTCGGAATTTATGGATCTCTCACCTTACCTGAATGAGTATATGTTTGTAGGATTCTCAGCTTCAACCGGTAACCACACACAAATTCACAACATACACTCTTGGAACTTCACTTCAAATAGCCAAGCTTTTCTTCGCTACCCTTCATCTGAAACATGTCAAGGTAAGATCATGCTTGAGAATACTACAGAAACAACAGCTGCTACCAATAAGAATTCTAAGAGGAACGAAACTCCGCGGAGCTTTTTGATTTTTGTGGCTGCTGTAGTGTTGGCTTTGGTTGTTTTAGTTGGTTTTTACTTTATCAGCAAACACAGAAGAAGTGTTTCTAAATCAAAGACTTCTATAGAGGAAGATATTCATAGGCCAAGGCCTCCTAACAAACCGCGCCGCTTCACTTTTTCAGCAATTTCCTCTTCGACTAGATCATTCAGTGAGATAGAAGTACTTGGAAGTGATACTAGAGGAGTATACTACAGAGGAAAGCTTAGTAATGGAAGCCAAGTAGCTGTGAAAAGATTCTCAGCTGAATTTCTCAACACACATGGATCCGATAAGAAGCGACTGTTGAAAGAAATCAAAGTCATTAGTCATGTTCGTCACCCAAATTTGCTTCCTATAAGGGGATGGTGTCAAGACAACAATGAAATCATTGCAGTCTATGATTTTGTCCCCAATGGAAGCCTCGATAAATGGCTATTCGGAGCCGGTGTTCTTCCGTGGACGCGTCGGTTCAAAGTCATCAAAGATGTAGCCGACGGTTTGAGTTTCTTGCACAGTAAACAACTAGCTCACAAGAACATGAAATGCAGCAGTGTTTTTCTAGATGTCAGCTTTAGAGCTGTTTTGGGAGATTTTGGATTTGTGCTATTGGGAGCAGAATCAAAACAGTTTGAGGCAGTAGTGTGTAATGGTGCTGATGTATTTGAGTTTGGTGTGATTGTGTTGGAAGTGATTGGTGGAAGGCCGAGGGTGGAGGAAACAGATGAAGGAAATTCGGAAGAGAGGAACTTATTGGATTATGCATGGAACTTGCATGAGACTGATGAGAAAGTGAAGCTGGTTGATAGAAGAATGGGATCATTGATCAATTTAGAGCAAGCGATTCGAGTTATGGAAATAGGGTTGCTTTGTACTTTGAATGAGAACAAAGGAAGACCTTCTATGGAGCAAGTTGTGGAGCTTCTGCATAACATGGAAAAGCCTATTCCTGAATTGCCAAGAACTAGACCTGTTGCTTTGTTTCCTTATAACAGTGCCAACACTGGACTTTGCAATAATTACTCTTGCACTTTGAAGCTGTGA 2034 0.3918 MASMSHIFLLFCFFNLKTHLVSSVYSASDAPINVTKHFSFLDFSFTNNSRLVHDLKLLGNAKFSNEKGSLQIPNESQETDIRHQAGRGLYSFPIRLLDPITKTPASFQTTFSFQLNNLSTNSDLSDYGGGSGLTFIIVPDEFTVGRPGPWLGMLNDACENDYKAVAIEFDTRKNPEFGDPNDNHVGINLGSIVSTKIINVSDVGISLKDGFVHHAWINYDGPRRRIDIRLGLANEDVYPVKPIFSEFMDLSPYLNEYMFVGFSASTGNHTQIHNIHSWNFTSNSQAFLRYPSSETCQGKIMLENTTETTAATNKNSKRNETPRSFLIFVAAVVLALVVLVGFYFISKHRRSVSKSKTSIEEDIHRPRPPNKPRRFTFSAISSSTRSFSEIEVLGSDTRGVYYRGKLSNGSQVAVKRFSAEFLNTHGSDKKRLLKEIKVISHVRHPNLLPIRGWCQDNNEIIAVYDFVPNGSLDKWLFGAGVLPWTRRFKVIKDVADGLSFLHSKQLAHKNMKCSSVFLDVSFRAVLGDFGFVLLGAESKQFEAVVCNGADVFEFGVIVLEVIGGRPRVEETDEGNSEERNLLDYAWNLHETDEKVKLVDRRMGSLINLEQAIRVMEIGLLCTLNENKGRPSMEQVVELLHNMEKPIPELPRTRPVALFPYNSANTGLCNNYSCTLKL 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02716 677 Gene3D - 34 287 - -
Tsu05g02716 677 PANTHER - 15 657 - -
Tsu05g02716 677 Pfam Legume lectin domain 38 286 IPR001220 GO:0030246
Tsu05g02716 677 SUPERFAMILY Concanavalin A-like lectins/glucanases 40 284 IPR013320 -
Tsu05g02716 677 Gene3D Phosphorylase Kinase; domain 1 357 466 - -
Tsu05g02716 677 Gene3D Transferase(Phosphotransferase) domain 1 467 545 - -
Tsu05g02716 677 Gene3D Transferase(Phosphotransferase) domain 1 546 655 - -
Tsu05g02716 677 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 15 657 - -
Tsu05g02716 677 SUPERFAMILY Protein kinase-like (PK-like) 364 639 IPR011009 -
Tsu05g02716 677 ProSiteProfiles Protein kinase domain profile. 387 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02716 677 Pfam Protein tyrosine and serine/threonine kinase 390 534 IPR001245 GO:0004672|GO:0006468
Tsu05g02716 677 CDD lectin_legume_LecRK_Arcelin_ConA 41 283 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02716 Tsu-Chr5 37208280 37210919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02716 9 658 Receptor kinase-like Gene Family AT5G55830 31.838 1.57e-94 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu05g02716 Lectin_legB 1.1e-55 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02716 - - gmx:100781464 1088.94