Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02706 ATGGCTCTAGGATTCTTCTATTATGGTATCCGAGACACAAATGCTACATACTCTGTTAACTTTCTAAACATGGTTCCTATTTTCACATTCATGATCTCTATCATATGCAGAATGGAGAGTCTAAGGATTGGAACATGGGGTGGCAAAGCCAAGTGCATTGGAGCACTTCTCTGTGTTGGTGGAGCCTTAGTAACCAGTTTATATAAAGGAAGGGAATTTTATATCTCTCATCATCATGCTCACCATTCAGCTCAGACAAGTGCTGTTGCAGCACATCAAATTCACATGCTTCGTGGCACTTTCTTTTTGATTGCAGCATGCTTCTCTTACACAACTTGGTTTATTTTGCAAGCAAAGTTGATGAATCTATTTCCACTGAGGTATTGGGGAACAATGCTATCATGCATTATGGCAACACTTCAGTCAGCAGTAATAGGCGTATGCTTAGACTCCAGCAAAGAAGTTTGGAGATTAGAGTGGAATCTACAGCTCATTACTATAATCTACTCAGGAGCATTGGCTACTGCGGCTACATTCTGTTTAATATCAATGGCAATAACACTCAAGGGACCTACTTACCCTCCAATGTTCAATCCACTAGCTCTTATTTTTGTTGCCATATCAGAGGCACTCATACTTGGTGAACCACTAAAAGTTGGAACGTTGGTGGGCATGGTTTTAATCATCTTGGGATTGTACTTCTTTTTATGGGGTAAAAAGAATGAGATACCACATTTGCCTCAAACAAATGTAGCAGCTGGAGAATTATCAACAAGCATAGCTGCTGATGATTCATTTCAGGCTCAATCAACTGATAATTCTTTACCAAATAAAAGTGTACatcttgaaattgaaaaaagcTGA 864 0.3854 MALGFFYYGIRDTNATYSVNFLNMVPIFTFMISIICRMESLRIGTWGGKAKCIGALLCVGGALVTSLYKGREFYISHHHAHHSAQTSAVAAHQIHMLRGTFFLIAACFSYTTWFILQAKLMNLFPLRYWGTMLSCIMATLQSAVIGVCLDSSKEVWRLEWNLQLITIIYSGALATAATFCLISMAITLKGPTYPPMFNPLALIFVAISEALILGEPLKVGTLVGMVLIILGLYFFLWGKKNEIPHLPQTNVAAGELSTSIAADDSFQAQSTDNSLPNKSVHLEIEKS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02706 287 Pfam EamA-like transporter family 98 236 IPR000620 GO:0016020|GO:0016021
Tsu05g02706 287 PANTHER WAT1-RELATED PROTEIN 1 253 IPR030184 GO:0016021|GO:0022857
Tsu05g02706 287 SUPERFAMILY Multidrug resistance efflux transporter EmrE 160 240 - -
Tsu05g02706 287 PANTHER WAT1-RELATED PROTEIN 1 253 - -
Tsu05g02706 287 Gene3D - 132 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02706 Tsu-Chr5 37107457 37109370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02706 5 240 Nodulin-like Gene Family AT1G09380 35.270 8.69e-45 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02706 - - gmx:100782551 372.089