Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02703 ATGAGCAACACGGAGAGAACTCAAGGTGTTGAGAAATGGTTCAAGTCTTCACAGGCTCTTCTTAGCATGTTATTAGTACAAATTTTTGCAATTGGATTGCAACTTCTATCAAGAGTTATTTTGATTCAAGGTACTTACATTTTTGCCCTCACTGCTTATCGTCATATTGTTGCTGCAATTTGTGTTGCCCCCTTTGCATTCTACTTTGAaagAGGACTGGCGAAGAATTTCAACTGGAGAGTTTGGTTGTGGCTTTTCTTTAATGGATTGGTGGGGATGACCATGGCTATAGGACTTTTCTACTATGGTCTTCGAGACACATCAGCTACATACTCTGTCAATTTTCTCAACTTGATTCCTATTTGTACATTCTTGATATCTATTATATGCAGAATGGAGAATATGAAGATTAGAACATGGAGTGGTAAAGCTAAGTGTATTGGAGCACTTATGTGTGTTGGTGGAGCATTAGCTACAACTCTTTACAAAGGGaagaaattttatattggtcGTCATCATATTATTGACCATTCTATTGAGATAATTGTTGTTGCAGCTCACAAAACTCACATGCTTCGTGGAACTTTGTGTTTGGTTGGATCCTGCTGCTCTTTCACAGCTTGGTTTATTCTGcaaGTAAAGTTTGCGAAAGTATTTCCATTAAGGTATTGGGGAACAATGTTATCATGCGTTATGGCAGCAATTCAGTCGACCGTAATAGGCGCATACATAGATCCCAGAAAAGAGGTTTGGAGATTAGAGTGGAATCTACAACTCATTACTATACTATACTCGGGTGCATTTGCTACTGCTGCAACATTTTGTTTAGTATCATGGATAATTACAATCAAGGGACCTTCCTATCCTTCAATGTTCAATCCATTGGTTCTGGTTTTTGTTGCCATTTCAGAGGCTATCTTACTTGGTGAACCACTCAAAGTTGGAACAGTCTATAAGGAATGTGGTCGTCGAATCTTCGGTGGCCGTATTCAAGCTGTTGGAGGTGgccaccttcttgaatggtcgGGAGTGCAAGTACCTTCGGGAAAGGGAGATGAAGCACGGGCACATGCCAAAGACTTCGGGGAGCGTCTATCTGTCGTTGAGAAGGATCTGATCTCGGAGACAAAAGCTCTAAAGGAGTCTCAAACAAAGGTCACCCAGCTGGAAAAGGATGTTCAGGATGCCAAGGAGGAAGAGGGGAGGTTGAAAGGGAAAATCGTGGAGCTCGAGGAGCAGGTGTCTCGTTTGTTACTAGGCCCTGTCGTGGAGGAGGAAGAAACGAAACTGGATCCGGGTGGTACATATGCCAAGTCCAGCCGGGCAGATCTAATTGCTAAGATCTATCAGATCAGCGATCTGCAGTTAGATGTTGCCTCCTCGAGCTTTAAGAATGCACTTGCCCAGCTCCAAGTCCTCAACCCTGACGTCCAGTTGGTTACCGAGGGCATGGACGAGATGAAAGAGGTCCGGGACGGCCAGATTGCTTCTCCTCCTCTCGAAGAAGAAGATTga 1515 0.4224 MSNTERTQGVEKWFKSSQALLSMLLVQIFAIGLQLLSRVILIQGTYIFALTAYRHIVAAICVAPFAFYFERGLAKNFNWRVWLWLFFNGLVGMTMAIGLFYYGLRDTSATYSVNFLNLIPICTFLISIICRMENMKIRTWSGKAKCIGALMCVGGALATTLYKGKKFYIGRHHIIDHSIEIIVVAAHKTHMLRGTLCLVGSCCSFTAWFILQVKFAKVFPLRYWGTMLSCVMAAIQSTVIGAYIDPRKEVWRLEWNLQLITILYSGAFATAATFCLVSWIITIKGPSYPSMFNPLVLVFVAISEAILLGEPLKVGTVYKECGRRIFGGRIQAVGGGHLLEWSGVQVPSGKGDEARAHAKDFGERLSVVEKDLISETKALKESQTKVTQLEKDVQDAKEEEGRLKGKIVELEEQVSRLLLGPVVEEEETKLDPGGTYAKSSRADLIAKIYQISDLQLDVASSSFKNALAQLQVLNPDVQLVTEGMDEMKEVRDGQIASPPLEEED 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02703 504 PANTHER WAT1-RELATED PROTEIN 17 317 IPR030184 GO:0016021|GO:0022857
Tsu05g02703 504 Pfam EamA-like transporter family 193 316 IPR000620 GO:0016020|GO:0016021
Tsu05g02703 504 Pfam EamA-like transporter family 23 148 IPR000620 GO:0016020|GO:0016021
Tsu05g02703 504 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 153 - -
Tsu05g02703 504 PANTHER WAT1-RELATED PROTEIN 17 317 - -
Tsu05g02703 504 Coils Coil 379 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02703 Tsu-Chr5 37049147 37067884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02703 20 316 Nodulin-like Gene Family AT1G09380 36.667 1.03e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02703 - - gmx:100782551 449.899