Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02657 atggaGTTCCAACTATTCATtgttcaatttcttcttctaacCTTCATATCTTCTCTTTTGAACTTTACTCTAGCTGACTTAAACTCTGACAGAAAAGCCCTTCTTAAATTCTCTTCTACTCTTCCACATACCCCAAAATTAAACTGGAACAACTCAACTCCAATTTGCACTTCATGGATTGGCATAACTTGcaacaaaaatgaaacaaatgtCATAAGCATCCATCTTCCAGGAATTGGATTAAAGGGAACCATTCCAAACAATAGCAGCCTTAGAAAACTTGATTCCCTTAAAATCCTAAGCCTTCATTCCAATGAACTTAGTGGAAATCTTCCTTCTAACATTCTCTGTATTCCTTCCCTTCAATATGTTAACCTTCAACACAATAACTTCACAGGTATAATCCCTTCTTTTATCTCGACAAAACTCATTGCGTTGGATCTTTCCTTTAACTCTTTCTTTGGAGCTATTCCTGTTTTCAACCTTTCAAGGctcaaatatttgaatttgagcTATAATAACTTGAATGGCTCAATTCCATTTTCTATTAATCAATTCCCTTACACTTCTTTTGTTGGAAACTCTCTTTTATGTGGTAAACCTCTCAATCATTGTTCAACAATTTCTCCCTCTCCATCTCCTTTGCCGTCAACTACTCAAAATCGAAAGGCTACAACTTCAAAGAAATTCTTTGGAGTAGCTTCTATACTTGCTTTAGCAATTGGAGGCATAGCCTTTCTTTCTCTCATAGTTTTGGTGATATTTGTGTGCTGtttgaagaagagaaagagtaAAAGAAGTAATGATATACCGAAAAGAAAGGTGGAGACCGAGGGTTCAATATCAAAGAGTTTTGGAAGTGGTGTGATGGAGGCTGAGAGGAACAAATTGTTCTTCTTTGAAGGTTGTTCATATAGTTTTGACCTCGAAGATTTGTTGAAGGCTTCAGCTGAAGTACTTGGAAAAGGAAGCTATGGAACAACATTTAAAGCTACATTGGAGGAAGGAATAACAGTTGTGGTTAAAAGGTTAAGGGAAGTTCTAGTTGGAAAGAAGGAGTTTGAGCAACAGATGGAGGCTGTTGGAAGAATTAGAAGACATTCCAATGTCATACCACTTAGAGCTTATTACTATTCAAAAGATGAGAAACTTCTTGTTTATGATTACATGCATGGAGGAAGCTTGTTTTCCAAACTTCATGGAAACAGGGGTGTAGGAAGAAATCCATTAAACTGGGATTCTAGAATGAAGATTGCACTAGGAGCTGCAAAGGGAATTGCTTCCATCCACACCGAAAGAGGCCCAAAATTTATTCACGGCAACATAAAGTCAACCAATGTACTCATAACACAAGAACATGATGGTTGCATCACTGATGTAGGACTCACTCCCCTAATGAACACCTCATCATGTTCAACCATGTCGAGATCCAATGGTTACCGCGCTCCAGAGTTGTTGGTCGAGTCAAGGAAGACCACCGCTCAGAAGAGTGATGTTTACAGCTTTGGGGTGCTCCTTCTTGAAATGCTTACAGGGAAGATTCCACTTGGATATTCTGGTTATGATCATGACATGGTTGATCTTCCAAGGTGGGTTAGGTCGGTGGTTTGCGAGGAATGGACGGCTGAAGTTTTGATGAGGAGATGA 1647 0.3716 MEFQLFIVQFLLLTFISSLLNFTLADLNSDRKALLKFSSTLPHTPKLNWNNSTPICTSWIGITCNKNETNVISIHLPGIGLKGTIPNNSSLRKLDSLKILSLHSNELSGNLPSNILCIPSLQYVNLQHNNFTGIIPSFISTKLIALDLSFNSFFGAIPVFNLSRLKYLNLSYNNLNGSIPFSINQFPYTSFVGNSLLCGKPLNHCSTISPSPSPLPSTTQNRKATTSKKFFGVASILALAIGGIAFLSLIVLVIFVCCLKKRKSKRSNDIPKRKVETEGSISKSFGSGVMEAERNKLFFFEGCSYSFDLEDLLKASAEVLGKGSYGTTFKATLEEGITVVVKRLREVLVGKKEFEQQMEAVGRIRRHSNVIPLRAYYYSKDEKLLVYDYMHGGSLFSKLHGNRGVGRNPLNWDSRMKIALGAAKGIASIHTERGPKFIHGNIKSTNVLITQEHDGCITDVGLTPLMNTSSCSTMSRSNGYRAPELLVESRKTTAQKSDVYSFGVLLLEMLTGKIPLGYSGYDHDMVDLPRWVRSVVCEEWTAEVLMRR 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02657 548 SUPERFAMILY Protein kinase-like (PK-like) 318 539 IPR011009 -
Tsu05g02657 548 ProSiteProfiles Protein kinase domain profile. 314 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02657 548 PANTHER OS05G0588300 PROTEIN 5 545 - -
Tsu05g02657 548 Pfam Protein kinase domain 318 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02657 548 Gene3D Ribonuclease Inhibitor 26 207 IPR032675 -
Tsu05g02657 548 SUPERFAMILY L domain-like 39 199 - -
Tsu05g02657 548 PANTHER LRR RECEPTOR-LIKE KINASE 5 545 - -
Tsu05g02657 548 Gene3D Transferase(Phosphotransferase) domain 1 390 548 - -
Tsu05g02657 548 Gene3D Phosphorylase Kinase; domain 1 281 389 - -
Tsu05g02657 548 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Tsu05g02657 548 ProSitePatterns Protein kinases ATP-binding region signature. 320 351 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02657 Tsu-Chr5 36499149 36501636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02657 7 547 Receptor kinase-like Gene Family AT5G58300 55.979 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu05g02657 Pkinase 1.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02657 - - cam:101501552 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02657 05 36499149 36501636 Tsu07g01470 07 13264691 13267610 PCT