Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02656 ATGGCCACCAATCAAGGGGTCCTTTCATCTCTTGACAATGCCAAAACACAAAGCTACCATTACATGGCAATAGTCATAGCAGGAATGGGATTTTTCACTGATGCATACGATCTCTTTTGCATCACCGCAGTTACAAAGCTTATCGGTCGTTTGTACTATTCTGATCCGACGAGCAATCTTCCAGGAATACTTCCAACAAACGTAAACAGCGCAATTACAGGTGTCGCATTGTGCGGCACCCTTGCAGGACAACTCTTCTTTGGCTGGCTTGGAGACAAACTTGGTAGAAAAAAAGTTTATGGCATAACTCTTACCACAATGGTTGGTTTTGCTCTACTATCAGGTCTTTCGTTTGGTTCCACGTCGAAAACTGTGGTTACTAGTCTTTGTTTCTTTAGATTCTGGCTAGGATTCGGCATCGGTGGAGATTATCCTCTCTCAGCAGTGATCATGTCTGAATATGCAAATCAAAAAACAAGAGGAAGTTTTATTGCTGCGGTTTTCGCTATGCAAGGAGTTGGAATATTGGTTGCCGGAGGCGTGGCCATGTTTGTCTCAAAACTATTCTTATCGGCGTTTCCAGCTCCTGACTATGAAACCAATCCTGTTTTATCCACTCAACCAGAAGGAGATTTTGTTTGGAGAATTGTGTTAATGTTTGGCGCAGTTCCCGCGGCTTTAACTTATTATTGGAGAATGAAAATGCCAGAAACTGCAAGATACACTGCTTTGGTTGAAGGAGATCACAAGAAAGCTGCTGAAGATATGGCGAAAGTTCTTGATAAGAACATAATTGTAGAAGAATCTAATACCAAGATTGATATCGGGCCACTCGCTTCCAGCTCCTATGGACTCTTCTCTTCAGAGTTTCTTGAAAGGCATGGACTTCACCTTCTAGGAACAACTAGCACATGGTTTTTATTGGATATTGCTTTTTACAGTCTTCAACTGACACAAAAAGATATTTATCCAGCTAGTGGACTTGTATTCAAGGCTTCCAAAATGAATGCTATACAGGAAGTGTTTCAACTCTCTCGTGCGATGTTCGTGGTTGCCTTGCTCGCCACGGTACCTGGATACTGGGCCACGGTTTTCCTAATTGACAAGATCGGACGGTACAGAATCCAACTTGTTGGATTCCTTGTAATGTGTGTTTGTATGTGGTTTCTTGGACACAATTATAGAGACTACAGGGGAGAAGCATCAAAATGCAAGAAAGGTTCAGAATATGACTATTGTGGTGGAAACCTAATCATGTTTGCTATACTTTTTGGACTTACACTTTTCTTTGCTAACTTTGGACCTAATAGTACTACATTTATAGTGCCGGCAGAACTGTTTCCTGCAAGGCTCCGTTCGACGTGTCACGGGATATCAGCGGCAGCAGGAAAATCGGGAGCTATCCTCGGTTCTTTTGTGGTGCAAAGCTATATAAATAATGCACATGATAAAACAATAGCAATCAAGAAAGCAATTATGGCACTTTCATTTGTCAACTTGCTTGGattcttttttactttcttGGTGCCGGAAACACAAGGTCGATCGCTCGAAGAAATCTCAGGAGAGGATAAAGAAATCCAAGGAAACATTGCAGACGAGGAAATAAATGATGCAAAAGAGGGAACAATAAACATTAGTGTTGATAAATCTCCAAGAACCTCAATGGTTTAA 1674 0.4122 MATNQGVLSSLDNAKTQSYHYMAIVIAGMGFFTDAYDLFCITAVTKLIGRLYYSDPTSNLPGILPTNVNSAITGVALCGTLAGQLFFGWLGDKLGRKKVYGITLTTMVGFALLSGLSFGSTSKTVVTSLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGSFIAAVFAMQGVGILVAGGVAMFVSKLFLSAFPAPDYETNPVLSTQPEGDFVWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGDHKKAAEDMAKVLDKNIIVEESNTKIDIGPLASSSYGLFSSEFLERHGLHLLGTTSTWFLLDIAFYSLQLTQKDIYPASGLVFKASKMNAIQEVFQLSRAMFVVALLATVPGYWATVFLIDKIGRYRIQLVGFLVMCVCMWFLGHNYRDYRGEASKCKKGSEYDYCGGNLIMFAILFGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKSGAILGSFVVQSYINNAHDKTIAIKKAIMALSFVNLLGFFFTFLVPETQGRSLEEISGEDKEIQGNIADEEINDAKEGTINISVDKSPRTSMV 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02656 557 Gene3D MFS general substrate transporter like domains 273 538 IPR036259 -
Tsu05g02656 557 Gene3D MFS general substrate transporter like domains 20 262 IPR036259 -
Tsu05g02656 557 CDD MFS_PhT 24 512 - -
Tsu05g02656 557 Pfam Sugar (and other) transporter 24 521 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tsu05g02656 557 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 514 IPR020846 GO:0022857
Tsu05g02656 557 SUPERFAMILY MFS general substrate transporter 12 522 IPR036259 -
Tsu05g02656 557 PANTHER PHOSPHATE TRANSPORTER 6 536 - -
Tsu05g02656 557 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02656 Tsu-Chr5 36491730 36493403 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02656 1 523 Inorganic Solute Cotransporters AT5G43360 61.726 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02656 K08176 - gmx:100820250 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02656 05 36491730 36493403 Tsu05g02656 05 36491730 36493403 ECH