Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02642 atgGAACCACATCTGAATGCAACAGCATCGTCCATGCTAAGAAGCAGCAGCAGGAGCATACCATTGCTAGCTCTTACTACCAGAATGCTTTCTTCTTCACcaccatcttcttcttcttcttctgtaaCTGCTTCATCTGAAACAAAATTAGGTTATTCTTCTATAAACCCTAAACCTTCATTCAAGAACCTTTCTCTATTCTCAAACAATCATTCTCTTCAAAGCATGACGAAGGTTTCAAATTGTTTCTCTCAGTCTGATGCAATACCGGTTTCTGAATCTGATTCAATAGATTCTCTTGTTGTTGTTTCGTTTTATAAGTTTGCGGATTTCCCTGACCATGCTGTTTTTCGTGATCCATTGAAGCATCTGTGTCAACAATTGCGTGTTTCAGGCGGTATCATTCTTGCGCCTGAAGGAATTAATGGAAGCCTATGTGGCACGAGGGAGTCGGTGGAGAAAGTTCTTGCATTTATTCAGAGTGATGATCGTCTGAAAGGTCTAAGACGCATTGAATCTCCTGTCAGTCCTGAGGAGGAGGCCATTCATCAGGAACATCATGGACACAGTCCCAGTTCTCCTCTTGCTGCTGGGGAGGATGTACCTTTCCGATGGGATCATGTGAGAGTCAAGTTGAAGAAAGAGATTGTCACTCTTGGGATGCCTACAGTATCACCTATGGAAAGGGTTGGAAAATATATTAGCCCAAAGGAATGGAATTCTTTGATTAGTGATCCTGATACAGTGGTAATTGATGTGCGGAATAACTATGAAACGAGAATAGGAAAATTTAAAGGAGCAGTTGATCCATGTACGGCGTCATTTCGTGAATTCCCATCTTGGGTGGAGGAACGTTTCGAGCTTACCAGAACAGGTGCTGAGCATCCAAAAGTTGATGTAAACCAGTCAGACCAAAGTGCTGAAAAAGAAACAGAgaatccaaaacaacatttGCCACGTGTTGCAATGTATTGCACTGGGGGTATTCGATGTGAGAAAGCTTCAAGTTTACTTCTCAGCAAAGGTTTTAAAGAGGTTTATCACCTGGAAGGTGGAATTCTGAAATATCTTGAGGAGGTTCCAGAGAGACAAAGTCTATGGGAAGGAGAGTGCTTTGTTTTCGACAAGCGAGTCTCCGTTGAGCATGGTTTGGCACCAGGAAATTTCAAGCTATGCTATGGTTGTAAGCAGCCTGTGAGTGATGCAGACATGGAATCACCAGAATATGAATATGGAGTCTCCTGTCCCTACTGTTTTGCACAGAAATCAGAAGAAGAGAAGGAGAGGGCTCGAGCTCGACAAAAACAATTTGAGAGATGGGGGATCATAGGTGGTCCTGATAAGGGCCGTCGGCCGACACAAGAGTCAGGCGGTGCTAGCAGcaatcaaaatcaactttcaaAGTCTGTTTAA 1413 0.4154 MEPHLNATASSMLRSSSRSIPLLALTTRMLSSSPPSSSSSSVTASSETKLGYSSINPKPSFKNLSLFSNNHSLQSMTKVSNCFSQSDAIPVSESDSIDSLVVVSFYKFADFPDHAVFRDPLKHLCQQLRVSGGIILAPEGINGSLCGTRESVEKVLAFIQSDDRLKGLRRIESPVSPEEEAIHQEHHGHSPSSPLAAGEDVPFRWDHVRVKLKKEIVTLGMPTVSPMERVGKYISPKEWNSLISDPDTVVIDVRNNYETRIGKFKGAVDPCTASFREFPSWVEERFELTRTGAEHPKVDVNQSDQSAEKETENPKQHLPRVAMYCTGGIRCEKASSLLLSKGFKEVYHLEGGILKYLEEVPERQSLWEGECFVFDKRVSVEHGLAPGNFKLCYGCKQPVSDADMESPEYEYGVSCPYCFAQKSEEEKERARARQKQFERWGIIGGPDKGRRPTQESGGASSNQNQLSKSV 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02642 470 MobiDBLite consensus disorder prediction 454 470 - -
Tsu05g02642 470 CDD RHOD_YceA 231 358 - -
Tsu05g02642 470 Pfam Rhodanese-like domain 235 358 IPR001763 -
Tsu05g02642 470 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 97 450 IPR020936 -
Tsu05g02642 470 Gene3D - 218 399 IPR036873 -
Tsu05g02642 470 MobiDBLite consensus disorder prediction 292 315 - -
Tsu05g02642 470 ProSiteProfiles Rhodanese domain profile. 244 365 IPR001763 -
Tsu05g02642 470 Gene3D - 90 217 - -
Tsu05g02642 470 Hamap tRNA uridine(34) hydroxylase [trhO]. 98 402 IPR020936 -
Tsu05g02642 470 MobiDBLite consensus disorder prediction 175 196 - -
Tsu05g02642 470 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 213 391 IPR036873 -
Tsu05g02642 470 MobiDBLite consensus disorder prediction 429 470 - -
Tsu05g02642 470 SMART rhod_4 234 362 IPR001763 -
Tsu05g02642 470 MobiDBLite consensus disorder prediction 301 315 - -
Tsu05g02642 470 Pfam UPF0176 acylphosphatase like domain 101 216 IPR040503 -
Tsu05g02642 470 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 97 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02642 Tsu-Chr5 36336937 36341186 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02642 74 453 Sulfurtransferasese or Rhodanese AT2G40760 74.419 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02642 - - mtr:MTR_5g067730 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02642 05 36336937 36341186 Tsu05g02642 05 36336937 36341186 ECH