Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02632 ATGGAAGAGGTCATGAATTTTATCATGCGTGCTTTTGAATTAGCCAAAGATCATGAACAAGAACTACCAAACATTTCCAACAACCCTGAAATGCTATTCTCATCCATTGATGAAGTTGAAAAAGCATTTAGTTCTGCAAAAGAAAGATTAATGATGATGTTATCATCACAACAtgacacaacaacaacaacatcaaaagCTTCGAATTCCTTTGCTCAAATTTTGTCTCATGATGTTTTCATGCAAAATAATCATGATCATGGTCAAATGGGTGGAAGTGGTACTTCAATGCATGCACATTCAATGGATCAATTGCTTCTAATGCAACACTCTTTTGAGATGTTAAGGTCTAGAGGAACTTTGATGATTGGTGAAATGGGTGGTAGGGATGTGGAAGGTTTAGAGAAATCAAAAGGGTCAGAAGGAGAAATGCAAGGAATCGAAGAACCACCATCACGACCAAAAAAAAGCAGCAGGAAGAATGATTTGGAGAAGAGAACACAGATGTTTCCAGCACCTCAGATTGGAAACACTGAAATGCCACCAGAAGATGGGTTCACTTGGAGAAAATATGGACAAAAAGAGATACTTGGCCGCAAGTATCCAAGgAGTTACTATAGGTGCACACaccaaaaattatatttgtgcCCCGCCAAGAAACAAGTACAAAGACTTGATAACAATCCTAACATAGTTGAAGTCACATATAGAGGTGAACACATTTGTCACAAATCCTTAACAGCACCATTATCATATCCACCACCACAAAACCTACTTGTCAATATCAATACTACTAGTACTCAAGCTACCATTCCTCCCGAGGCGTGGCCGCCAGCGGTGAATCTCGGCCTCGGGGGTGGAAATGGTAATGGCGGACCGTCTACTTCAAGATTCGGCATTGATTATCCGGTAGCCGATATGGCTGATGCAATGTTCAACTCAGGTAGTAGCAGTGGCAATAGTATGGAATCACTTTTTCATCCAAGTGAAGATAAATGGGAACCTGATGAAAAGATAAACTGA 1023 0.3861 MEEVMNFIMRAFELAKDHEQELPNISNNPEMLFSSIDEVEKAFSSAKERLMMMLSSQHDTTTTTSKASNSFAQILSHDVFMQNNHDHGQMGGSGTSMHAHSMDQLLLMQHSFEMLRSRGTLMIGEMGGRDVEGLEKSKGSEGEMQGIEEPPSRPKKSSRKNDLEKRTQMFPAPQIGNTEMPPEDGFTWRKYGQKEILGRKYPRSYYRCTHQKLYLCPAKKQVQRLDNNPNIVEVTYRGEHICHKSLTAPLSYPPPQNLLVNINTTSTQATIPPEAWPPAVNLGLGGGNGNGGPSTSRFGIDYPVADMADAMFNSGSSSGNSMESLFHPSEDKWEPDEKIN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02632 340 ProSiteProfiles WRKY domain profile. 183 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu05g02632 340 PANTHER WRKY TRANSCRIPTION FACTOR 55 1 261 - -
Tsu05g02632 340 SMART WRKY_cls 182 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu05g02632 340 SUPERFAMILY WRKY DNA-binding domain 179 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu05g02632 340 MobiDBLite consensus disorder prediction 127 186 - -
Tsu05g02632 340 MobiDBLite consensus disorder prediction 314 340 - -
Tsu05g02632 340 Pfam WRKY DNA -binding domain 183 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu05g02632 340 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 261 IPR044810 GO:0003700
Tsu05g02632 340 MobiDBLite consensus disorder prediction 129 166 - -
Tsu05g02632 340 Gene3D WRKY domain 172 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02632 Tsu-Chr5 36169737 36173624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02632 1 326 WRKY Transcription Factor Family AT2G40740 36.336 1.04e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu05g02632 WRKY 7.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02632 - - mtr:MTR_5g067680 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02632 05 36169737 36173624 Tsu05g02632 05 36169737 36173624 ECH