Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02609 ATGGAGCATCAATCCCTCACTTCTCATCCCAATTCCGCTGATTCATCCCCTAACTCTCGTGAATTGCTCGAAAACAACTATCACCGTTCACCATTCGATgaacaaccaccaccaccaccttctAATTCCAACAGAGTCAAGTTAATGTGTAGTTACGGTGGAAAAATTCAACCGAGGCTACAGGATCATCACTTTACGTACATCGGTGGTGATACCAAAATCCTAACCGTCGATCGTGCCGTCAAATTAAGCACACTCGTTGGTAAGCTTTCAATAATGGCGAATTGTGATATTTGCTTCAAGTATCAACTCCCTGGTGAAGATCTCGATGCTTTGATCTCCGTTTGCAACGAGGAAGATCTCGATCATATGATGATCGAGTACGATCGGTTGTGTCGCGTTTCGCCTAAACCTGCTAGGTTGAGACTATTTCTCTTCCCTGCACcagtcaacaacaacaacaaggacGACGAGGACGAATCTGCTGATTCTTCCGTCTCCGCTGTAATTCTCGCCGCGGTGGAAGATTCCAAATCGGAAGGACAATGGTTCATCGACGCGCTCAATTCCGCTAATGTTCCACCGTTGGAAGAATCTCCTCCGCCGCCTCCGACGTTGAATCCAGATTATTTGTTCGGTTTAGGTAAACCGTATTCTGATACTCCGTCGACAAATCAAGCGGAATTTCCGGTAACTGTTCCGGATTTTCCGTTGATGGAAACTGAATGTGAGCCAGAAACGGTTAAAGAAACTGAGATTCAGCCAGAAACGGTTCAAGAAACTGAGATTCAGGAACTTGAGAGAATGGAGTTTGTGAATATTGAACAGGAAGTGAAAGTTGACGGAGAAAACGGCGGAATTAACGGTGTTTTTGACTGTTATACTGAAGAAAACGCGGAAAAAGTGATTCCGTTAGTTACTAATGAACCTGTTCAGAGTCCGACTCAGTCTCTGGATCAAATTCAAATCCAACCCGGTTCATTTCAGGTTCAGATTCCTGAACCGGTACCGGTTCAGTCAATGTTTTCTCCTGTAAGGCATCATAATGTGGCTCCTAGTGGTTACTCAATGGGGTATCCAAATGAACCGGCTCCGGTTTATCTGATTCAAACATCTGCAGGATTGTATCAAGCACTGAGGCCGGTAACCGGACCACACGGTCAACCGGTTTATTTCGCCTATGCACAAATTGTGAACCAGTTTGGTTACAATGGTTCAGTTTCAGGGGTACCTGGTGTGGTTTCTGAGAATGGCTATTCCAATGGTTCTTATGTGTCTGATAGATCAGCTTTGCCATTGTAG 1302 0.4324 MEHQSLTSHPNSADSSPNSRELLENNYHRSPFDEQPPPPPSNSNRVKLMCSYGGKIQPRLQDHHFTYIGGDTKILTVDRAVKLSTLVGKLSIMANCDICFKYQLPGEDLDALISVCNEEDLDHMMIEYDRLCRVSPKPARLRLFLFPAPVNNNNKDDEDESADSSVSAVILAAVEDSKSEGQWFIDALNSANVPPLEESPPPPPTLNPDYLFGLGKPYSDTPSTNQAEFPVTVPDFPLMETECEPETVKETEIQPETVQETEIQELERMEFVNIEQEVKVDGENGGINGVFDCYTEENAEKVIPLVTNEPVQSPTQSLDQIQIQPGSFQVQIPEPVPVQSMFSPVRHHNVAPSGYSMGYPNEPAPVYLIQTSAGLYQALRPVTGPHGQPVYFAYAQIVNQFGYNGSVSGVPGVVSENGYSNGSYVSDRSALPL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02609 433 PANTHER OS05G0427100 PROTEIN-RELATED 1 400 - -
Tsu05g02609 433 SUPERFAMILY CAD & PB1 domains 62 151 - -
Tsu05g02609 433 MobiDBLite consensus disorder prediction 1 25 - -
Tsu05g02609 433 Gene3D - 65 147 - -
Tsu05g02609 433 Pfam PB1 domain 65 147 IPR000270 GO:0005515
Tsu05g02609 433 SMART PB1_new 60 148 IPR000270 GO:0005515
Tsu05g02609 433 CDD PB1_UP2 49 146 - -
Tsu05g02609 433 MobiDBLite consensus disorder prediction 1 45 - -
Tsu05g02609 433 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02609 Tsu-Chr5 35821793 35823264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02609 44 169 MAP Kinase Kinase Kinase AT5G57610 40.458 6.18e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02609 - - cam:101512371 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02609 05 35821793 35823264 Tsu05g02609 05 35821793 35823264 ECH