Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02585 atgcctCACAGAGCAACTTACTTTTTTCCTAGGCAATTTCCCGAGAAAAGATTGGATGAATCATCTTCAAAGAAGATATTAGATCAcgagaagaaaaaatttgttggaGTAGTCAAATCAACGGATACTACTTTTTGCGTTGAAAGCGACGCGCCGAAAACATCTTCTGTTTCTGTTGTTGCTAATAAAGACGACGTCGTTTTCTCTTCAGTCAAAAACTCAGCTGTTTCCGATCTTCTTACCGGCGGCGATAAGTTTCGATGTGAGCAGAAGCAAATTGCAGCGTTTTGTGATTGGTTAGTTGATAAACGACATAATCACCACCATCGCCGCCGTCAtcatcaccaccatcatcatcagcACCGGCACCGATCGGAGGAGGATCGTGAGGTTCTACTTCCGCATCCTGATGATGTGAAATCGGCGTCGCCGGAAAAAGATCCTGTTGATGTTGATCGGAGCTTTGATAGGGAGGTTTCGCTTCCAAGATTGTCGAGTGGAAGCAGTTACGCTACGAGTTTGTTTGCTTCGGATGTTACCGTTACTGCTACATTTTCAAGTGATGATATTACGAAAGAAGATACGTCGTCGTTTCTTGTTTCTACAAATGAAGTAGTTACAAGAAGGAACGAACAACAGAAacagaaagaagaagatgaagaacatcatgaagaagaaaaacgCGATGGAGAGAACTATGCTAGGAAGTACAAAGAAAGCTATGAACTACAATTAGCTTCGGCGAAGAGGATTTCTTTTCTGTCAAGTCTTGGTTCTGAACCAGTTCTCACTTTTGATACTGGATTAGAAACTTGGGACGTTGAATCAGTTTCTCGTCGTTTATGGGTGACAGGGTGTTTGTCATACACGGACAAGATTTCGGACGGATTTTATAACATATTGGGAATGAATCCATATTTGTGGCTGATGTGCAATGATACGGGGGAAGAAGGGAATTTCCTTCCTACATTGATGGCACTCAAAGCAGTTGAACCCAAAGAGAGTTCGTTGGAAGTGATTCTTATTGACAGACGTGAGGATTCTCGTCTTAAGGTGCTTCAAGATAAAGCTCAAGAATTGTATTCTGCTTCTGAGAATGCCTTGGTGCTCGTTGAGAAGCTCGGAAAACTTGTTGCTATATTTATGGGGGGCACCTTCCCTGTGGAGCAAGGGGATATGCAAAAGAGGTGGAAGATGGTTAGTAAGCggttgagaaattttcatcAGTGTGTTGTACTTCCTATTGGTAGTTTGTCTACAGGACTCTGTAGGCATCGCGCGATTCTCTTCAAGAGATTGGCAGATTATATAGGTTTGCCATGCCGTATTGCTCGAGGTTGCAGGTACTGTGCTTCGGATCATCAATCATCTATTCTTGTGAAGATTAAAGATGACAGGCAACTGTCAAGGGAGTATGTTGTTGACCTGGTTGGGGAACCAGGAAATATTCTTGGGCCAGATTCATCAATTAATGGAGCATATGTGTCTTCCATACCTTCCCCATTTCAAATTTCTCACTTGAGAGATTCTCAATCGTCCTATACGGATGATGCAGCATCTCCTCAAGTTATATGTTTTAATCAGAATTCTCCCAACAATCACCTGTATTCAGGCCATTTAGAGGAAGatcaacaaaataaagaaaCTGATTTgctcaaaaataataataatggtttcAATTATGCTTCAGTTGATCGAACTTGTGGAGGTGTTTCTGAAGCTCTTCGCCCAGCCTCTGAAGCATTATTACATGAAATTCCATTTGTTGGTAAAGATTCAGTTGTAGTCAAAGAAATTTCTTACAATGAGATCATTGCAAAGGGAAGTTCGGTGGTAAATGGTATCCAGTCAAAGCTGGAACAGGTAGACAAAAGGCTAGAAAACCAGGGTACTGGGGATATTCCAAAATATGTGAATCTTGAACCATCACTAGCAATGGACTGGCTTGAAATATCATGGGATGAGTTACGGATCAAAGAACGCATTGGTGCTGGATCATTTGGGACAGTGTACCGTGCTGAATGGCATGGATCAGATGTTGCTGTCAAAGTTTTATCAGTTCAGAATTTCCACGATGATCAGTTGAAAGAGTTTTTGAGAGAGGTTGCAATAATGAAACGTGTTCGCCATCCAAATGTTGTGCTCTTCATGGGTGCGGTTACAAAACGGCCTCATCTATCTATAGTGACAGAGTATTTGCCTAGAGGTAGTTTATTCCGCCTGATACATAGGCCAGCAACTAGTGAAATTAAGGATCCAAGGAGAAGATTACGAATGGCTATAGATGTGGCTAAAGGAATCAATTATCTCCACTGTCTGAAGCCTCCAATCGTGCACTGGGATCTCAAATCCCCGAACCTGTTGGTAGACAAAAATTGGAATGTAAAGGTCTGTGATTTTGGGTTGTCCAGATTTAAAGCGAACACTTTCTTGTCATCAAAATCTGTTGCTGGAACAccTGAGTGGATGGCTCCCGAATTTCTTCGTGGAGAACCTACAAATGAGAAGTCTGATGTTTACAGTTTTGGAGTTATTCTGTGGGAACTTGTGACCTTACAACAACCTTGGAATGGACTTAGCCATGCCCAGGTGGTTGGAGCAGTGGCATTCCAGAATAGGAGACCTTCTATCCCTCCAAACATCTCCCCAGTATTGGCCTCACTTATGGAATCTTGTTGGGCTGATGACCCTGCTGATCGCCCATCTTTTGCTAGCATAGTTGAGACACTAAAGAAGCTGCTTAAGTCACCAGCGGATGCGATAAAAATGGGTGGAACATAA 2781 0.4031 MPHRATYFFPRQFPEKRLDESSSKKILDHEKKKFVGVVKSTDTTFCVESDAPKTSSVSVVANKDDVVFSSVKNSAVSDLLTGGDKFRCEQKQIAAFCDWLVDKRHNHHHRRRHHHHHHHQHRHRSEEDREVLLPHPDDVKSASPEKDPVDVDRSFDREVSLPRLSSGSSYATSLFASDVTVTATFSSDDITKEDTSSFLVSTNEVVTRRNEQQKQKEEDEEHHEEEKRDGENYARKYKESYELQLASAKRISFLSSLGSEPVLTFDTGLETWDVESVSRRLWVTGCLSYTDKISDGFYNILGMNPYLWLMCNDTGEEGNFLPTLMALKAVEPKESSLEVILIDRREDSRLKVLQDKAQELYSASENALVLVEKLGKLVAIFMGGTFPVEQGDMQKRWKMVSKRLRNFHQCVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIARGCRYCASDHQSSILVKIKDDRQLSREYVVDLVGEPGNILGPDSSINGAYVSSIPSPFQISHLRDSQSSYTDDAASPQVICFNQNSPNNHLYSGHLEEDQQNKETDLLKNNNNGFNYASVDRTCGGVSEALRPASEALLHEIPFVGKDSVVVKEISYNEIIAKGSSVVNGIQSKLEQVDKRLENQGTGDIPKYVNLEPSLAMDWLEISWDELRIKERIGAGSFGTVYRAEWHGSDVAVKVLSVQNFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHRPATSEIKDPRRRLRMAIDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWNVKVCDFGLSRFKANTFLSSKSVAGTPEWMAPEFLRGEPTNEKSDVYSFGVILWELVTLQQPWNGLSHAQVVGAVAFQNRRPSIPPNISPVLASLMESCWADDPADRPSFASIVETLKKLLKSPADAIKMGGT 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02585 926 Pfam Ethylene-responsive protein kinase Le-CTR1 274 483 - -
Tsu05g02585 926 CDD STKc_MAP3K-like 662 910 - -
Tsu05g02585 926 MobiDBLite consensus disorder prediction 135 154 - -
Tsu05g02585 926 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 139 924 - -
Tsu05g02585 926 MobiDBLite consensus disorder prediction 209 233 - -
Tsu05g02585 926 ProSiteProfiles Protein kinase domain profile. 656 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02585 926 Pfam Protein tyrosine and serine/threonine kinase 656 910 IPR001245 GO:0004672|GO:0006468
Tsu05g02585 926 PRINTS Tyrosine kinase catalytic domain signature 837 859 IPR001245 GO:0004672|GO:0006468
Tsu05g02585 926 PRINTS Tyrosine kinase catalytic domain signature 881 903 IPR001245 GO:0004672|GO:0006468
Tsu05g02585 926 PRINTS Tyrosine kinase catalytic domain signature 771 789 IPR001245 GO:0004672|GO:0006468
Tsu05g02585 926 PRINTS Tyrosine kinase catalytic domain signature 730 743 IPR001245 GO:0004672|GO:0006468
Tsu05g02585 926 MobiDBLite consensus disorder prediction 108 129 - -
Tsu05g02585 926 SUPERFAMILY Protein kinase-like (PK-like) 636 910 IPR011009 -
Tsu05g02585 926 Gene3D Transferase(Phosphotransferase) domain 1 735 922 - -
Tsu05g02585 926 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 139 924 - -
Tsu05g02585 926 ProSitePatterns Protein kinases ATP-binding region signature. 662 683 IPR017441 GO:0005524
Tsu05g02585 926 Gene3D Phosphorylase Kinase; domain 1 649 733 - -
Tsu05g02585 926 MobiDBLite consensus disorder prediction 108 122 - -
Tsu05g02585 926 Coils Coil 208 229 - -
Tsu05g02585 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Tsu05g02585 926 MobiDBLite consensus disorder prediction 204 233 - -
Tsu05g02585 926 SMART serkin_6 656 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02585 Tsu-Chr5 35201284 35209575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02585 1 925 MAP Kinase Kinase Kinase AT4G24480 55.510 0.0 1006
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Tsu05g02585 PK_Tyr_Ser-Thr 2.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02585 - - gmx:100786546 1301.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02585 05 35201284 35209575 Tsu05g02585 05 35201284 35209575 ECH
Tsu05g02585 05 35201284 35209575 Tsu07g01062 07 8870389 8876868 PCT