Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02583 ATGAACGAAGAACAAAACAAGATAAGCTTCTTCACTGCAACCAACAACTCagGTTTTCTAGTTGACCCTTCAATGTGTGGTGTGCTGAATTTCCAAGACAAGCAAAGACTTGTCCATGAGGTTGCTCGTCAGTCCAAAGATGCCCCAAATATACTTCAAGCATTTACACGCCGGGAACTCCTAGAATTAATCTGTGCTGAATTAGGCAAAGAAAGGAAGTACGCGGGATATACTAAGGATCAGATGATAGAATATCTTCTGAAGTTAGTTTCTAAGAAATCCAACCTGCACGTTGAACAAAATGGTCTTGCTCATTCTCCTGCCAAAAGTTGCATAGGATCTAAACGGAAAAAAGGACCTCCGTCTTCTGATTTACATAATGTTCAATTAGAGAACACTAATGAGGAAACAATGAAGACCTTAGTGTGTCAGAATGTTGCATGCAAAGCTAAGCTGAATCCAGAAGATTCGTTTTGCAAGAGATGTTCTTGTTGTATATGTCGTTGTTACGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGCACCTCTGATAATCCCAATGAAGGGTCATGTGGAATGTCATGCCATTTGCAATGTGCTTTGAGTAATCAAATGTCTTGCATTTTGAAGGGAAGTTGCGGTAAAACCTTGGACGGAAGCTTCTATTGTGTTTCTTGTCGAAAAATTAATGACTTAATGAGGACATGGAGAAAGCAATTATTGGTTGCCAAAGATGCAAGAAGAGTTGATATACTCGCTTTGCGAATATCCTTGGCCCACAGAATTCTCATAGGAACAAAAGTCTACAAAGAATTGCAGAGGATTGTAGAAACTGCTCTCAAATTACTGGAGAATGAAGTGGGACCTCTGGATCATGTATATGCTAGGATGACGCGTGGAATTGTGAGCAGACTCTCATGTGGTGCTGAGGTTCAGAAGTTGTGTTCTACTGCAATTGAATGTTTTGATTTGAAGTTTTCTGAACTCTTTTCTAGTTGTGCAGAAAAGAAAGAAGCACCAACATGCTCATTACATTTTGAAGAGTGTCTTCCTACCTCAGTGGTCATTGTGCTTGAATACAAAGAAAAACTTTTAAAGAACTTTCTAGGCTGCAGGCTTTGGCACGGAAAATCAACAATGGACTATCCAGAACAACCCACTTTCATTGTTTTGAGGCCCGAGAAAAGATTCAAGTTAGAAAACCTCACACCTTCAACTGAGTATTCTTGCAAAGCTTCTATTTTCAGCAGCACAGGGATTTTGGGTGCGGCAGAAGCTAAATGGGTGACGCCTTGTCAACCACCTTCAAAAATTATTCGACATATTGCAAATCATTCAAATATTAACAAATGTGCACAAAACCATTCAACTATCAGGGAAAGGTTTGAAGAGTTCCTCACCAAGCCCCCAACGATAGAATCTTTTTCATATAAAAGTTTTGCAGCAGTTCCACCTGCCACGCCTTCTAAATCCAATGAAATGAGACAACTTACTGGTTTTAATTCTAGAAAGCGCGTGAAAGAAAATGATTACGAGTATTCTGTGAGAGTAGTCAAATGGTTAGAGCATCAAGGGCACATAGACGAAATCTTCAGAGTGAAGTTTCTGACATGGTTCAGTCTCAAGGCTAATCAGCAAGAGAGAAGGGTGGTTAGTGCTTTTATTGATGCATTGATTGATGACCCTGCAAGCTTAGCAGACCAGCTAATACACACTTTCACCGACGAAATATGTTGCGAGCAAAAATCTTAG 1755 0.3989 MNEEQNKISFFTATNNSGFLVDPSMCGVLNFQDKQRLVHEVARQSKDAPNILQAFTRRELLELICAELGKERKYAGYTKDQMIEYLLKLVSKKSNLHVEQNGLAHSPAKSCIGSKRKKGPPSSDLHNVQLENTNEETMKTLVCQNVACKAKLNPEDSFCKRCSCCICRCYDDNKDPSLWLTCTSDNPNEGSCGMSCHLQCALSNQMSCILKGSCGKTLDGSFYCVSCRKINDLMRTWRKQLLVAKDARRVDILALRISLAHRILIGTKVYKELQRIVETALKLLENEVGPLDHVYARMTRGIVSRLSCGAEVQKLCSTAIECFDLKFSELFSSCAEKKEAPTCSLHFEECLPTSVVIVLEYKEKLLKNFLGCRLWHGKSTMDYPEQPTFIVLRPEKRFKLENLTPSTEYSCKASIFSSTGILGAAEAKWVTPCQPPSKIIRHIANHSNINKCAQNHSTIRERFEEFLTKPPTIESFSYKSFAAVPPATPSKSNEMRQLTGFNSRKRVKENDYEYSVRVVKWLEHQGHIDEIFRVKFLTWFSLKANQQERRVVSAFIDALIDDPASLADQLIHTFTDEICCEQKS 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02583 584 PANTHER VIN3-LIKE PROTEIN 2-RELATED 12 584 IPR044514 GO:0010048|GO:0040029
Tsu05g02583 584 PANTHER OS08G0220600 PROTEIN 12 584 - -
Tsu05g02583 584 MobiDBLite consensus disorder prediction 107 127 - -
Tsu05g02583 584 Pfam PHD - plant homeodomain finger protein 143 262 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02583 Tsu-Chr5 35181843 35187039 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02583 18 530 PHD Gene Family AT4G30200 34.929 3.84e-83 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02583 - - gmx:100785502 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02583 05 35181843 35187039 Tsu05g02583 05 35181843 35187039 ECH