Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02573 ATGAAGGGCATAATTACAAGGTATAATCAGCACTCCCAACAAATCAACAAATTGGACGAACCTTTGCAACTGCAGGTAGAGACAAGCGTTTCAGCTGAATTGCATAGGGAAGTTGCTGATAAAACTCAACAACTAAGGGGAATGAAAGGTGAAGATTTTGAAGGGTTAAATTTAGAGGGGCTACAACAATTGGAGAAAAAACTTGAAATTGGACTCAAGCGTGTGATTCAGATGAAGGGAATTTActatcttaattttctttataaccATATTCCAAAAAAGGGTGTCAAGTTAGAAGAGGAGAACAAGCATTTAAAGCAAAAGATGGCTATGTTTTTTAAGGGAAAAATTAGGGTTGCCGTTTCCCTAATTGAATTGGGATGGATAATGGAGCAAAGGGGGATTTTAACTTCTTGTGGAAGCAATAACTTCTTATATgtgaagctaaaaaaaacttaa 459 0.3377 MKGIITRYNQHSQQINKLDEPLQLQVETSVSAELHREVADKTQQLRGMKGEDFEGLNLEGLQQLEKKLEIGLKRVIQMKGIYYLNFLYNHIPKKGVKLEEENKHLKQKMAMFFKGKIRVAVSLIELGWIMEQRGILTSCGSNNFLYVKLKKT 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02573 152 ProSiteProfiles K-box domain profile. 24 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Tsu05g02573 152 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 124 - -
Tsu05g02573 152 PANTHER MADS-BOX PROTEIN AGL24-LIKE ISOFORM X1 1 124 - -
Tsu05g02573 152 Pfam K-box region 32 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02573 Tsu-Chr5 35059213 35068597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02573 1 117 MADS-box Gene Family AT4G24540 42.857 2.74e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02573 - K09264 rcu:8268411 112.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02573 05 35059213 35068597 Tsu05g02573 05 35059213 35068597 ECH