Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02569 ATGATGAACGCAACTCGAGCAGAAGCAGAACGGTTACTCGGAATCTCAGAAAAACTCTTACAAAACCGAGATCTAATGGGTTCAAAAGAATTCGCAATCTTAGCACAAGAAACAGAACCTCTTCTAGAAGGTTCCGATCAGATCTTAGCAATTATTGATGTTCTCATCGCCTCTGAAAAACGCATCAACAACAACCCTGACTGGTACGCCATCCTCCAAATTGATCGTAGATCCGACGACCTCGACCTCATAAAAAAACAGTACCGCCGTCTCGCACTCCTCCTTCATCCCGACAAAAGCCGATTTCATTTCGCCGATCATGCTTTTAAGCTCGTAGCTGATGCCTGGGCTGTTCTCTCCGATCCAATCAAGAAATCTCATTACGATAAAGATCTATCGTTTTTTGCTCGTGTTGATTTATCTGTTCCTGGTTGGGTTCAGCAAGATAAGTTACCGGTTCGAAGAACCGGTCCTGGGTCTGGGGTTGGACCTGGAACGGGACCTGGTAACGGTCCACGGAACAGTGCGGCTTCTGCTAGAGATGAGATAGCGGCGGATGTTCGTAGGAACGCGACGTTTTGGACGGCGTGTCCTTACTGTTACCGTTTGTATGAGTACCCTAAGGTTTATGAGGGTTATTGTTTGAAATGTCCTAATTGTGAAAGATCTTTTCACGGTGTTAATGTTCCGTCTTTGCCTCCGTTAGTTCCAGGGCAAGAAGCTTATTATTGTTGCTGGGGTTTTTTTCCTATGGGGTTTGTGCATGGTGGTTCTGTTGAGAAAGAGGCTGAGCTGGTGCCCGAGGTTGTGCAGGATGAACCTGCTCCGGTGCCAATTGCCGTTCAGCCTGCTTCTTCGCTTCCGAATTGGATGCCAGCTCCTGTACCTGTGGAGAATGGTGGGAATAATGTAATGCCGGTGGCACCGGTCTCAGCTACGGTTACTACGCCTGCAAGGGTGACAACAAGGTCAGGTATTGTTACCGGTGGTGTTGCAAATGGTGTTGCTGGTTCGGGATCAGGTCCGAAGAAGCGAGGAAGGCCAAGGAAGTATTATTAA 1059 0.4788 MMNATRAEAERLLGISEKLLQNRDLMGSKEFAILAQETEPLLEGSDQILAIIDVLIASEKRINNNPDWYAILQIDRRSDDLDLIKKQYRRLALLLHPDKSRFHFADHAFKLVADAWAVLSDPIKKSHYDKDLSFFARVDLSVPGWVQQDKLPVRRTGPGSGVGPGTGPGNGPRNSAASARDEIAADVRRNATFWTACPYCYRLYEYPKVYEGYCLKCPNCERSFHGVNVPSLPPLVPGQEAYYCCWGFFPMGFVHGGSVEKEAELVPEVVQDEPAPVPIAVQPASSLPNWMPAPVPVENGGNNVMPVAPVSATVTTPARVTTRSGIVTGGVANGVAGSGSGPKKRGRPRKYY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02569 352 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 350 - -
Tsu05g02569 352 MobiDBLite consensus disorder prediction 332 352 - -
Tsu05g02569 352 MobiDBLite consensus disorder prediction 151 180 - -
Tsu05g02569 352 PRINTS DnaJ domain signature 69 87 IPR001623 -
Tsu05g02569 352 PRINTS DnaJ domain signature 88 103 IPR001623 -
Tsu05g02569 352 PRINTS DnaJ domain signature 104 124 IPR001623 -
Tsu05g02569 352 CDD DnaJ 67 121 IPR001623 -
Tsu05g02569 352 Pfam DnaJ domain 67 129 IPR001623 -
Tsu05g02569 352 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 350 - -
Tsu05g02569 352 Gene3D DnaJ domain 55 138 IPR036869 -
Tsu05g02569 352 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Tsu05g02569 352 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Tsu05g02569 352 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Tsu05g02569 352 SMART dnaj_3 66 124 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02569 Tsu-Chr5 34964214 34965749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02569 3 349 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 48.023 7.85e-102 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02569 - - gmx:100816918 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02569 05 34964214 34965749 Tsu05g02569 05 34964214 34965749 ECH
Tsu05g02569 05 34964214 34965749 Tsu07g01043 07 8722407 8723336 PCT