Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02552 ATGGGGAAGCAAAATGCTGCTGCGTCTGCAGCGATGAACTCGGGTGTCGATATGAATACGATTTCAAGGAATGAGGCAGTACCAACTTATGAATCCCCTGCACTACCTCATATGCAGTTAGGAAACTCTAACGAACCTCATGGTTGGTTTTATTGTTTGCCTCGATTTCGACAGGGTTTTACGTGTCCTCCAAACTTCACTTCTGAGGAAAAACTTTCTCCTCCTAGTCATTTGAAGGGTTTTAAGGAGGAAATTGCACCCAATGGGGAATTAGGATTTCCTCAGAAGCAGTTCCTCGTCATTGATCAAACGGGTGATCAAACAACTCTCATTTATAGTTCAAGATTTGGGAGCCCTGTTGAGTGCCTCGGTTCCTGGGATTCAAAATTGCATGGTTGTAACAATTTTAATGGGAAAAATGAACCTTCTTTAAGAAGAGACATGAATCATGTGGTTGAACTTGGATTTGGACCGACTTTTGATTATAAAGTTGATGAAAATGATAATCAAGGAACTGAGACTGAAAGCGAGATGCACGAAGACACAGAGGAGATTAATGCATTGCTTTACTCAGACAGCGATGCAGATAGTTATTCTACCGAGGATGATGAAGTTACCAGCACTGGGCATTCACCCAGTACAATGACCACTCATGATAACCAGGAACCTTTCCGAATTGGAGGAATCGCCGAAGAAGTTGCTAGCTCCTCTCCTGGAAAAGCAAAGAAACGTAAGCCATTCGATGTGGCTTATGATCATGATGATGTGCAGTTTACAGACACTGCAAATTCTCTAAAACAAAAGCGACGCATCGACCACACGGGATATGATGACGATGCAGAATCCAGATGCTCTGGTAGCAATTGCGGTCGTGGGTCATGTGAAATGGGTTCCTTAACAGGCACTAAGAAGATGAGAAAGGAAAAGATTCAAGATGTTCTAAGTATTTTGCAGTGCATAGTTCCTAATGGGAAGGACAAGGAACCAGTCCAGCTTCTGGATGAAGCCATTCGTTGCTTAAAATCTTTGAAACTCAAGGCTAGAGCTCTTGGACTCGATGCCTCGTAA 1068 0.4298 MGKQNAAASAAMNSGVDMNTISRNEAVPTYESPALPHMQLGNSNEPHGWFYCLPRFRQGFTCPPNFTSEEKLSPPSHLKGFKEEIAPNGELGFPQKQFLVIDQTGDQTTLIYSSRFGSPVECLGSWDSKLHGCNNFNGKNEPSLRRDMNHVVELGFGPTFDYKVDENDNQGTETESEMHEDTEEINALLYSDSDADSYSTEDDEVTSTGHSPSTMTTHDNQEPFRIGGIAEEVASSSPGKAKKRKPFDVAYDHDDVQFTDTANSLKQKRRIDHTGYDDDAESRCSGSNCGRGSCEMGSLTGTKKMRKEKIQDVLSILQCIVPNGKDKEPVQLLDEAIRCLKSLKLKARALGLDAS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02552 355 MobiDBLite consensus disorder prediction 162 182 - -
Tsu05g02552 355 MobiDBLite consensus disorder prediction 202 221 - -
Tsu05g02552 355 MobiDBLite consensus disorder prediction 166 182 - -
Tsu05g02552 355 MobiDBLite consensus disorder prediction 194 221 - -
Tsu05g02552 355 PANTHER TRANSCRIPTION FACTOR BHLH145 1 353 IPR037546 -
Tsu05g02552 355 PANTHER TRANSCRIPTION FACTOR BHLH145 1 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02552 Tsu-Chr5 34682055 34683122 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02552 48 348 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 30.233 1.76e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02552 - - mtr:MTR_5g065670 551.592