Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02550 ATGTTGTGGGAATGGGAAGatgaagaacaacaacaacaccaattTCACGACAACAACACTTCCCAGAAACCCGACCCAACTTCCTATCTAAATTTCGATTTCTTCTCCGCTCTCTCCAAACCAAAGGATTATTACAAGATATTGGAAGTTGATTACGATGCAACCGAAGATACTATTCGCTCTAATTACATTCGTCTTGCTTTGAAATGGCACCCGGATAAACAGAAAGACCAGGATTCTGCCACGTCACGATTTCAAGATATAAACGAGGCTTATCAGGGTattaatttatcattattattacgCTGTTAA 312 0.3526 MLWEWEDEEQQQHQFHDNNTSQKPDPTSYLNFDFFSALSKPKDYYKILEVDYDATEDTIRSNYIRLALKWHPDKQKDQDSATSRFQDINEAYQGINLSLLLRC 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02550 103 SMART dnaj_3 42 100 IPR001623 -
Tsu05g02550 103 MobiDBLite consensus disorder prediction 1 25 - -
Tsu05g02550 103 Gene3D DnaJ domain 35 98 IPR036869 -
Tsu05g02550 103 PRINTS DnaJ domain signature 80 100 IPR001623 -
Tsu05g02550 103 PRINTS DnaJ domain signature 63 78 IPR001623 -
Tsu05g02550 103 PRINTS DnaJ domain signature 45 63 IPR001623 -
Tsu05g02550 103 Pfam DnaJ domain 43 93 IPR001623 -
Tsu05g02550 103 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 93 - -
Tsu05g02550 103 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 93 - -
Tsu05g02550 103 SUPERFAMILY Chaperone J-domain 26 93 IPR036869 -
Tsu05g02550 103 CDD DnaJ 43 93 IPR001623 -
Tsu05g02550 103 ProSiteProfiles dnaJ domain profile. 43 103 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02550 Tsu-Chr5 34647342 34647905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02550 36 93 C2H2 Transcription Factor Family AT1G74250 36.508 7.53e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02550 - - jre:108985063 136.346