Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02498 ATGGATAAATTTTGCTGTTTGAAGTCTTCATTCTCTAAGCTTGTATCGACGCGATCATCATCTAGTACTGGTAAAGGAAAAAATCATGAAGGGTCAATTAAGTATGGTTTCACCCTAGTGAAAGGGAAAGCGAATCATCCAATGGAGGATTACCATGTTGCCAAGTTTGTGCAGACACAGGGAAAAGAATTGGGTTTGTTTGCTATTTATGATGGCCACTTGGGGGATCGCGTGCCTTCATATTTACAGAAACATCTATTTTCCAACATTTTAAAGGAGGATGAATTTTGGAATGACCCTGGTGCATCTATATCAAAAGCATATCTGAGCACAGATCAGACAATTCTTTCACATAGTTCTGATTTGGGGCGTGGCGGATCAACAGCTGTAACTGCAATATTAATCAACGGTCAAATTTTATGGACAGCTAATGTTGGAGATTCACGAGCAGTTCTTTCAAGAAAAGGTCAAGCAGTGCAATTGACTACAGATCATGAGCCCAATACAGAGCGAGGCATCATTGAGAACAAAGGTGGTTTTGTCTCTAACTTGCCAGGTGATGTCCCTAGAGTAAATGGACAACTGGCAGTTTCTCGTGCATTTGGAGACAAGAGTCTCAAATCTCATTTGCGATCGGACCCTGATGTACAGAATACTGATGTAGATGTTGATATTGATATTCTAATCCTTGCAAGTGATGGACTTTGGAAGGTAATGGCTAATCAAGAGGCAGTTGATATTGCTAGAAAGGTGAGAGATCCACTGAAAGCAGCTAAACAATTAACAGCTGAAGCATTAAAAAGAGACAGCAAAGATGATATATCTTGTGTTGTGGTTAGATTTAGgtgttga 852 0.3955 MDKFCCLKSSFSKLVSTRSSSSTGKGKNHEGSIKYGFTLVKGKANHPMEDYHVAKFVQTQGKELGLFAIYDGHLGDRVPSYLQKHLFSNILKEDEFWNDPGASISKAYLSTDQTILSHSSDLGRGGSTAVTAILINGQILWTANVGDSRAVLSRKGQAVQLTTDHEPNTERGIIENKGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQNTDVDVDIDILILASDGLWKVMANQEAVDIARKVRDPLKAAKQLTAEALKRDSKDDISCVVVRFRC 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02498 283 PANTHER PROTEIN PHOSPHATASE 2C 1 282 IPR015655 GO:0004722|GO:0006470
Tsu05g02498 283 CDD PP2Cc 33 281 IPR001932 -
Tsu05g02498 283 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Tsu05g02498 283 Gene3D - 29 283 IPR036457 -
Tsu05g02498 283 SMART PP2C_SIG_2 45 281 IPR001932 -
Tsu05g02498 283 SMART PP2C_4 30 279 IPR001932 -
Tsu05g02498 283 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Tsu05g02498 283 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 1 282 - -
Tsu05g02498 283 SUPERFAMILY PP2C-like 32 282 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02498 Tsu-Chr5 33979478 33983872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02498 1 282 PP2C-type Phosphatase Gene Family AT1G22280 71.528 1.11e-146 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02498 K17506 - gmx:100797292 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02498 05 33979478 33983872 Tsu05g02498 05 33979478 33983872 ECH