Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02485 ATGGCAACCGCACCAACACCACGCGAAGAGTTCGTCTACATGGCTAAACTCGCCGAACAAGCCGAACGTTACGAAGAGATGGTAGAGTTCATGGAAAAAGTTACCGTCGCCGTCGAAAGCGAAGAACTCACCGTCGAAGAGAGGAACCTCCTCTCCGTTGCTTACAAAAACGTGATCGGAGCAAGACGCGCTTCATGGAGGATCATTTCTTCCATCGAACAGAAGGAAGAAAGCAGAGGCAACGATGAACACGTGTCGGTCATCCGTGACTACAGATCTAAGATCGAAACTGAACTTTCCAATATCTGTAACGGTATTCtgaaacttcttgattctcgcTTGATTCCTTCTGCTGCTTCTGGTGACTCTAAGGTTTTCTACCTTAAGATGAAAGGTGATTATCATAGGTATCTTGCTGAGTTTAAGAGTGGCGCTGAGCGTAAAGATGCCGCTGAAAGCACTCTTACTGCTTATAAATCTGCTCAGGATATTGCAAACTCTGAACTGCCACCAACTCACCCCATCAGGCTTGGTCTAGCTCTGAACTTCTCGGTGTTCTATTATGAGATTCTTAACTCTCCTGACCGTGCTTGCGGCCTTGCAAAACAGGCTTTTGATGAAGCTATTGCTGAACTGGATACTTTGGGAGAGGAGTCATACAAGGATAGCACTTTGATCATGCAACTTCTCCGTGATAACCTCACCCTTTGGACCTCTGACATGCAGGATGATGGTGCAGATGAAATCAAAGAAGCTGCACCTAAAGGGGCTGATGAGCAGTAA 783 0.4534 MATAPTPREEFVYMAKLAEQAERYEEMVEFMEKVTVAVESEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDEHVSVIRDYRSKIETELSNICNGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKSGAERKDAAESTLTAYKSAQDIANSELPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKGADEQ 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02485 260 PANTHER 14-3-3 PROTEIN 6 257 IPR000308 -
Tsu05g02485 260 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Tsu05g02485 260 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Tsu05g02485 260 Pfam 14-3-3 protein 14 238 IPR023410 -
Tsu05g02485 260 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
Tsu05g02485 260 Coils Coil 14 34 - -
Tsu05g02485 260 Gene3D - 2 251 IPR036815 -
Tsu05g02485 260 SMART 1433_4 8 251 IPR023410 -
Tsu05g02485 260 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Tsu05g02485 260 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Tsu05g02485 260 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Tsu05g02485 260 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Tsu05g02485 260 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Tsu05g02485 260 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Tsu05g02485 260 PIRSF 14-3-3 2 250 IPR000308 -
Tsu05g02485 260 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 6 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02485 Tsu-Chr5 33653052 33655903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02485 8 260 14-3-3 family AT1G78300 90.551 3.28e-171 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02485 K06630 - gmx:100794129 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02485 05 33653052 33655903 Tsu05g02485 05 33653052 33655903 ECH