Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02435 ATGTTACATCCACAACTAGTAGTTGCTGCTAGTGTTGACAATACTAGTTATGTTCCATCAGAAAACATAGTTCTTAATTGTGGTTCTAACACATCACAACTTGTTCAATATGATGGTAGAATCTGGAATGGTGACATTGATTCACCATATATACCTTCCAATGgaaacatcatcaaaaactCCTTAATTGCAACAGTACCTTCTACCAATCTTCAATCCATTCCTGAAGTTCCTTATATGACTGCTAGAATTTTTCAATCTAAATTCACTTATAGCTTCAATGTAACTTCAGGTCCGAAATTCATACGCCTTCATTTCTACCCTGCTgattatttgaatttcaacatCTCAAAAGCTTTCTTATCAGTAACTGCTGGTAATTTCACTCTTCTGCATAATTTCAGTGTTTCTCTCAATGCAGATTACTTTAACTTAGCATATTTAATGAAAGAATTCATTGTCCATGTAAACGGGAACAGTTTGGAACTTACTTTCGCGCCATCATCAAATGATTCTGATTCATATGCATTTGTGAATGGTATTGAAGTTGTTTCAATCCCACATGGTTTATACATTGGTGGCGATGATTCGCCTATTCCTTTAGTAGGCCACTATCCAGATGTTGTTTACATTTATAATGATTCAGCTATGGAAAATCTGTATAGATTGAATGTAGGAGGTGAGCAAATTCTACCAAAATATGATACTGGTATGTTTCGAAATTGGGATATGGATGATGGTTACATATTTGGGGCTGATGCTAGTATTAAACCCTTTGATGTGAGCATGAAAGTTTTGTATAATGATCATGTTCCGGCTTATACCGCCCCGAGTGATGTCTACCGCACGTCACGTTCGATGGCTTCGTTTGAGAAAGGACTtgtcaatttaaattacaaTCTGACATGGTTTTTTTCAGTTGATTCTGGCTTCTTGTATCTAATTAGGCTTCATTTCTGCGAAACTTACTACGCTATAACAAGGGTCAATGAGGTTGTTTTTTCAGTGTTTTTAAATAATCAGACAGCTGAAAAAGAGTTTGATCCAGTTGGAACGAGTGGAGGACCTGGAGTTCCTATTTACAAAGACTTCATAGTGATGGTTCCTAAAGACAGTGATGCAAAGCAAGATCTTTGGTTAGATCTTCACCCTTACAAGTATGCAAAACCTTTGTACTACAATTCTTACTTAAATGGTGTGGAGATCTTTAAACTTAGCAATGTTGATAACAATGATAAGAAGAATCTTGCAGGTGTTAACCCTTCTGAAAGAAAGTTAGGATCATCTTCAACGGCCACACCGCATGTTGTTGCAAAAGTTAAAAACTCAAAGAAACTTATATTCATTCTCATTGGATGTGGATTTAGTGCAGTGGCAATACTAATTCTTTTGTACTTAGTTCTATTGAAGTTGAATGTTATTAGGCCTAGAAGGTTCATGCCATGTTGTGTCCTTTCACCTAATCAAATTGAAAAGGCAAAAaagtcatcatcatcatcatttttctGTCAATTTTCATTAAAAGAGATAAAAGTAGCAACAAATGACTTCAATGAGGCTTTACTTTTAGGAACAGGTGGATTTGGAAGTGTTTACAAAGGTAGCTTTAATGGTGGTACATCTTTTGTAGCTATAAAACGCGCTGATCCAATGTCTCAACAAGGTGTTGTAGAATTTGAGACAGAGATTCATTTGCTCTCGCGCATACGCCATAACAATTTGGTCTCGCTTTTGGGCTATTGCAATGAAGATGATGAGATGATCCTTATCTATGACTTCATGGAAAATGGAACTCTTTATGACCATCTTCATTTGAAGCAAGGATATCAATATCAACCTCATTTGTCATGGATTCAAAGACTTGAAATTTGCATTGGAGTAGCACGAGGTTTGCATTACTTACACACTGGTACAAAGCCTAAGATCATTCACCGTGATATCAAGACGACAAACATACTCTTAGACCATAATTTAGTAGCTAAAATTTCAGATTTTGGTTTGTCAAAGGAAACCTACAGTTCATTAAACACCACCGTCGTAAAGGGTAGCACTGGTTACCTTGATCCTGAATACTATCAACGCCGCATGTTGACTGAGAAATCTGATTTATACTCACTTGGTGTGGTTTTGTTGGAAGTGCTAAGTGCAAGACAAGTTATAATTCcatatgaagatgatgatgagcaTTTAAACTTGGCTGAATGGGCTAAGTTTTGCATTGAGAATGGAAATGTGGATGAAATAGTGGATCCAAACTTGGAAGGAAACATTGTTAAGGAGTGCTTTGAGTTATATTTAGATGTTGCTATGAAATGTTTGGCTGAAAGTGGAGTGGAGAGACCATCCACTGGTGATGTTCTGCAGAATCTTTTTGCTGCAATGAAACTTCAGAAAAATGGTGGTAATGTTCAAACTGAAAAATTTAGTAGGAATGATGACTTGAAGGACTATTCAGATTTAACACCTGGGATAGAGTTCTCTGATATCATGATGCCTGTTGGTAGATGA 2508 0.3529 MLHPQLVVAASVDNTSYVPSENIVLNCGSNTSQLVQYDGRIWNGDIDSPYIPSNGNIIKNSLIATVPSTNLQSIPEVPYMTARIFQSKFTYSFNVTSGPKFIRLHFYPADYLNFNISKAFLSVTAGNFTLLHNFSVSLNADYFNLAYLMKEFIVHVNGNSLELTFAPSSNDSDSYAFVNGIEVVSIPHGLYIGGDDSPIPLVGHYPDVVYIYNDSAMENLYRLNVGGEQILPKYDTGMFRNWDMDDGYIFGADASIKPFDVSMKVLYNDHVPAYTAPSDVYRTSRSMASFEKGLVNLNYNLTWFFSVDSGFLYLIRLHFCETYYAITRVNEVVFSVFLNNQTAEKEFDPVGTSGGPGVPIYKDFIVMVPKDSDAKQDLWLDLHPYKYAKPLYYNSYLNGVEIFKLSNVDNNDKKNLAGVNPSERKLGSSSTATPHVVAKVKNSKKLIFILIGCGFSAVAILILLYLVLLKLNVIRPRRFMPCCVLSPNQIEKAKKSSSSSFFCQFSLKEIKVATNDFNEALLLGTGGFGSVYKGSFNGGTSFVAIKRADPMSQQGVVEFETEIHLLSRIRHNNLVSLLGYCNEDDEMILIYDFMENGTLYDHLHLKQGYQYQPHLSWIQRLEICIGVARGLHYLHTGTKPKIIHRDIKTTNILLDHNLVAKISDFGLSKETYSSLNTTVVKGSTGYLDPEYYQRRMLTEKSDLYSLGVVLLEVLSARQVIIPYEDDDEHLNLAEWAKFCIENGNVDEIVDPNLEGNIVKECFELYLDVAMKCLAESGVERPSTGDVLQNLFAAMKLQKNGGNVQTEKFSRNDDLKDYSDLTPGIEFSDIMMPVGR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02435 835 Gene3D - 22 186 - -
Tsu05g02435 835 Gene3D - 215 406 - -
Tsu05g02435 835 ProSitePatterns Protein kinases ATP-binding region signature. 523 546 IPR017441 GO:0005524
Tsu05g02435 835 PANTHER OS07G0166700 PROTEIN 14 835 IPR045272 GO:0004714|GO:0006468
Tsu05g02435 835 Gene3D Phosphorylase Kinase; domain 1 484 593 - -
Tsu05g02435 835 ProSiteProfiles Protein kinase domain profile. 517 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02435 835 SMART serkin_6 517 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02435 835 SUPERFAMILY Protein kinase-like (PK-like) 493 791 IPR011009 -
Tsu05g02435 835 PANTHER FERONIA RECEPTOR-LIKE KINASE 14 835 - -
Tsu05g02435 835 CDD STKc_IRAK 523 790 - -
Tsu05g02435 835 Pfam Malectin-like domain 25 404 IPR024788 -
Tsu05g02435 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Tsu05g02435 835 Pfam Protein kinase domain 522 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02435 835 Gene3D Transferase(Phosphotransferase) domain 1 594 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02435 Tsu-Chr5 32660054 32662561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02435 6 835 Receptor kinase-like Gene Family AT3G51550 45.172 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu05g02435 Malectin_like 3.8e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02435 - - gmx:100776859 1150.19