Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02434 ATGAAGGAAACTCAAATAATAGAGTCATCTAGATTTGTAACTATCTTTAGTACTTTGTTCTACTTTTTCTTCATTAATTTAACATCTTGtgattcagattcaataaaCATTTCTTCTGACAAAATTCTACTTAACTGTGGTTCATCTGAATCATCAACATTCAATAGTGTCAATTGGATAGGAGACATTGGAACAACTTTCTTGCCTCCATCATATGAAACAATTTCATCAACAACACTCTTACTctcaaacataaataaaatagcACCAAAAATCCCTTACTCAACAGCAAGAATAATTCCTCATTCTTCACTCACCTActcttttcctttctcttcttctGGCCTTAAATTCATTCGTTTATATTTTCTCTCAACTTCATATTTACCAATATACCCTTCAAACTCCAAGTCCTATTTTTCAGTCAAATCTGGTTCTTACACTCTTGTTTACAATTTCAATCCATTACTTGCTGCACAAGAAATCAACTCACCTTATATCACCAAAGATTTCTTTGTCaacatcaaagaaaaaaaactcaacattACTTTTACTCCATCTCCTCAAATTCCAAAAGCTTTTGCTTTTATAAATGGAATTGAAACATTCTCAGTACCCAACAATTTATTCTCTCATCATGCTACAAATTCTAATGTTTCTGTTCCTTACCTTGGTCAAAAAGAACGGTTTTTTCTCAACAATGAATATGCTTTTGAGAAGCTATACATGGTTCACATGGGAAATGAAGTTGACCCTAATGCATTTGGGTCATGGCTAGATGATACAAACTACATTTCTGGTTCACAATATGGAACTATTCTTGTCTTGGGAGATGCTAGAGTTAATATGAATGATAGTTTTCTCAATTCAAATGACTATACCTATTCAGCACCAGAAAATTTATATTGGTCTGCAAGAACAATGAGTAGTAGCAATGGAGATTCAAACATGAGGTACAATTTAACATGGTCATTTTCGGTTGATTCTGGATTTAAGTATCTTGTTAGACTTCATTTCTGTGAGATATCTATGTTGGTAACAGATATTAATCAGAGGGTTTTCAGTGTTTATATAAATAACCAAACAGCTGAGGAAAAATTGGATTTAGTTGCTTTGGTTGGTGAACCTTTAAGTCCTTTGTATAGAGACTATGTTGTAAAGGTTCCTATTGAGACTGAGATAAGGAAAGTTTTCATGTTGATCTCACTTCATCCCAATTTGGAGTCAAAACCAAAGTATGCTGATGCTATATTGAATGGAGTTGAAATTAGTAAGTTAAGTGACAATAATTATAATCTTGCTTCAAGATTTCAATTCAAGAATGAAGAAGTACATAAGGAAAAgaaatttccaatttttattgttGTGGTGGCAAGTACTTTTGGTTCCATTTTGGGACTTTTCATAACATTTTTCATTCTTCGAAGAAAAACATGGAgacaaataaaaattggaacttttcaGGTTCTTAAATTGACTTCTACTGCAAGAAATGAAGAAAAGGTTCAAGTAAAGGTGATATCAGGTAATTGCTATCAATTCACTTTAGCAGAGATTATATCAGCAACAAGTAACTTCAATGAAGATCTTGTGATTGGAGAAGGAGGTTTTGGAAAGGTATACAAAGGAATCATCATGCTTGATGAAGTGACTAATGTGGCCATAAAGCGCGCTAAACCGAGTTCGCGTCAAGGATTTAAGGAATTTCAAAATGAGAtaaattttcattcattttctcacatgaacttagTTTCATTGTTGGGCTACTGCCAAGAGAGCAATGAACTGATACTTGTGTATGAATACATGAGTCAAGGTACACTTTGTGATCATTTAAACAAGAAACAGAAGGAACCACTTTCATGGAATCAAAGACTAGAGATATGTGTTGGTGCTGCTAGAGGAATCCATTACCTTCATACAGGTAGAAAGAATCTGGTTATTCATCGCGATATCAAGTCATCGAACATACTATTGGATCAAAATTTGGTACCAAAGATTGCAGATTTTGGGTTGTCTAGAATGGTTGATTCCAGTTACCACACTCATGTTAGTACTGAGGTTAAAGGTACTTTTGGATATTTAGATCCTGAGTACTACAAGAGAAGAAAATTGAGTGAAAAAAGTGATGTTTATTCATTTGGTGTGGTTTTGTTTGAAGTGTTGAGTGGAAGAGGAGCAGTGAATCCTATGGCAATAGAAGAGGAAAATGAGAAAGTTGGATTGGTAGAATGGGCTAGGCATTGTTACCAATCTGGAACTATTGATAATTTGGTTGATTCTTGTTTAGAAGGAAAAATAGGGTTAGAATGCTTAATGGACTTTGTGGAAATTGGTATTCAGTGTTTGGCTAACAAGAGTGTAGAAAGGCCAACTATGGGAGATGTGCTGAGTAGTTTGGAGAAAATTCTTTCCTTGCAGAAAAGTTTGGAGGAGCCGGAAATCAATGTAGTCAAAATGgctatgtag 2469 0.322 MKETQIIESSRFVTIFSTLFYFFFINLTSCDSDSINISSDKILLNCGSSESSTFNSVNWIGDIGTTFLPPSYETISSTTLLLSNINKIAPKIPYSTARIIPHSSLTYSFPFSSSGLKFIRLYFLSTSYLPIYPSNSKSYFSVKSGSYTLVYNFNPLLAAQEINSPYITKDFFVNIKEKKLNITFTPSPQIPKAFAFINGIETFSVPNNLFSHHATNSNVSVPYLGQKERFFLNNEYAFEKLYMVHMGNEVDPNAFGSWLDDTNYISGSQYGTILVLGDARVNMNDSFLNSNDYTYSAPENLYWSARTMSSSNGDSNMRYNLTWSFSVDSGFKYLVRLHFCEISMLVTDINQRVFSVYINNQTAEEKLDLVALVGEPLSPLYRDYVVKVPIETEIRKVFMLISLHPNLESKPKYADAILNGVEISKLSDNNYNLASRFQFKNEEVHKEKKFPIFIVVVASTFGSILGLFITFFILRRKTWRQIKIGTFQVLKLTSTARNEEKVQVKVISGNCYQFTLAEIISATSNFNEDLVIGEGGFGKVYKGIIMLDEVTNVAIKRAKPSSRQGFKEFQNEINFHSFSHMNLVSLLGYCQESNELILVYEYMSQGTLCDHLNKKQKEPLSWNQRLEICVGAARGIHYLHTGRKNLVIHRDIKSSNILLDQNLVPKIADFGLSRMVDSSYHTHVSTEVKGTFGYLDPEYYKRRKLSEKSDVYSFGVVLFEVLSGRGAVNPMAIEEENEKVGLVEWARHCYQSGTIDNLVDSCLEGKIGLECLMDFVEIGIQCLANKSVERPTMGDVLSSLEKILSLQKSLEEPEINVVKMAM 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02434 822 PANTHER OS07G0166700 PROTEIN 38 814 IPR045272 GO:0004714|GO:0006468
Tsu05g02434 822 CDD STKc_IRAK 532 803 - -
Tsu05g02434 822 Gene3D Phosphorylase Kinase; domain 1 487 602 - -
Tsu05g02434 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Tsu05g02434 822 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 38 814 - -
Tsu05g02434 822 ProSitePatterns Protein kinases ATP-binding region signature. 532 556 IPR017441 GO:0005524
Tsu05g02434 822 Gene3D - 239 426 - -
Tsu05g02434 822 Gene3D - 42 205 - -
Tsu05g02434 822 Pfam Protein tyrosine and serine/threonine kinase 531 798 IPR001245 GO:0004672|GO:0006468
Tsu05g02434 822 SMART serkin_6 526 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02434 822 Pfam Malectin-like domain 44 425 IPR024788 -
Tsu05g02434 822 ProSiteProfiles Protein kinase domain profile. 526 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02434 822 Gene3D Transferase(Phosphotransferase) domain 1 603 819 - -
Tsu05g02434 822 SUPERFAMILY Protein kinase-like (PK-like) 504 801 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02434 Tsu-Chr5 32654461 32657011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02434 39 812 Receptor kinase-like Gene Family AT3G51550 42.910 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu05g02434 Malectin_like 1.2e-27 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02434 - - gmx:100776324 989.949