Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02363 atgGTTCCAAGTGAGATTAGAGGAGTCAATTATCTACCTCAACCTGAAAATTCATTCCAAATTCCACAAAACTTTGTCTTACCACaaaatgaaattccaaatttcCATCTAAATAATCTCTTAAACAGCTTACCAACAAATTATCATTATCCATCAGCTGGCCATGAATTTGCACCTCCTTCATGTCTAAGTAGCAACTCAACTACTTCTGATGAAGCAGATGAACTTCAGTTCAATATCATCGACGAAAGGAAACACCGACGAATGATATCAAACAGAGAATCTGCTAGGAGATCAAGGATGAGGAAACAAAAACACTTAGATGAACTTTGGTCACAGGTTGTAAGACTTAGAACTGAAAATAACAACCTTGTTGATAAACTTAACCATGTTTCTGAGTCACATGATAAAGTTGTTCAAGAGAATGCACGTCTCAAGGAAGAAACTTTCGATCTTCGTCAAATGGTAGCCGATATGCAAATCGGTAACTCTTTTCCTTGTAACATGGAAGATTTTGGTGAAATTCCATGCAGCACTTCACCACACAAAGATGATTCCTCTAAAATTCAAGATTAA 576 0.3542 MVPSEIRGVNYLPQPENSFQIPQNFVLPQNEIPNFHLNNLLNSLPTNYHYPSAGHEFAPPSCLSSNSTTSDEADELQFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENNNLVDKLNHVSESHDKVVQENARLKEETFDLRQMVADMQIGNSFPCNMEDFGEIPCSTSPHKDDSSKIQD 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02363 191 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Tsu05g02363 191 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Tsu05g02363 191 Pfam bZIP transcription factor 84 142 IPR004827 GO:0003700|GO:0006355
Tsu05g02363 191 SUPERFAMILY Leucine zipper domain 84 134 IPR046347 GO:0003700|GO:0006355
Tsu05g02363 191 Coils Coil 128 148 - -
Tsu05g02363 191 Gene3D - 82 138 - -
Tsu05g02363 191 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Tsu05g02363 191 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Tsu05g02363 191 PANTHER BZIP PROTEIN (ATBZIP48) 1 188 - -
Tsu05g02363 191 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 188 IPR044521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02363 Tsu-Chr5 31380155 31380730 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02363 28 175 bZIP Transcription Factor Family AT3G30530 54.651 9.11e-52 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu05g02363 bZIP_1 9.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02363 - - gmx:100778078 275.789