Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02358 ATGTGGAAAATTAAGACCGTTGTACGTAAGAAAATGGTAGAGATGAGCAAATTGCCTATTCAGGACTTCAGACAGGACAAGATCAAAGAGAAACTAAAGAAAGTTAGACAAAAAGCCAAAATCATGCCTATGGAGTTGCTTGAGAAAAGAATACAGATCAATAAAGTTGGAAGATTGACCTATAGAATGGACTTCACAAAACTCTGTCATGCAACAGAATACTTTAGCATGAATAATGTCATTGGGTTGGGAGTAACTGGTATAATGTACAAGGCAACTCTTTCCAATGGTTGTTTCTTGGCGGTTAAGAAACTATATGATTCTCAATTGTCTATCAAAAGGTTTGAGATAGAAATAATGATTTTGGGGCAATACAATCATAGAAACATAGTTCCTTTGATTGGTTTTtgtattgaagaaggaaaaactgaattttttttggtgtatCAATATATGTCAAATGGAAAGCTTTCAGATAGGTTGAATGAAACTACAAAATTAAGATGGGAAATAGTTATCAAAATTGCACTTGGAGTTGCAAGAGGATTATGTTGCCTCCATCATAGCTTGCATTTGGTTCATCTCAATATAAATTCTGACTGTATCTTGCTAGGGAAAAATTTTGAGCCAAAAATATCCAATTTTGGAGGAGCCATGTTTATGAATAATGATTTGAACAAAGACATAGGACTTGAAAAGAAGGATGTTTTTGACTTTGGTTGTCTGCTTTTTGAGCTAATTAATGGGAAGAAATTTGGCCAAATATGTGAATATTTAAGCAATATTAATGTTCCTCTATGTGAATATAATCATGTAAATTTGTTGGAGGATGACCCTTCTAGATTTTGTGATGCAGTGGATGAATATCTAAACAAGAGAGAATTTGAAGATGAGGTATATACTCTTCTTAGAGTTGCACGTGAATGTGTTCATCCTTTACTTGAAAAAAGGTCTACTATGTTTGAGGTGTACAACAAGATATGGAATATATGGGAGAAAGATAGAATTTGTGAAAATCCTGACTTCTCATTTATAGATTCTGTTACTCCTACTGTTAGCCTAATATCTAACTAG 1074 0.3231 MWKIKTVVRKKMVEMSKLPIQDFRQDKIKEKLKKVRQKAKIMPMELLEKRIQINKVGRLTYRMDFTKLCHATEYFSMNNVIGLGVTGIMYKATLSNGCFLAVKKLYDSQLSIKRFEIEIMILGQYNHRNIVPLIGFCIEEGKTEFFLVYQYMSNGKLSDRLNETTKLRWEIVIKIALGVARGLCCLHHSLHLVHLNINSDCILLGKNFEPKISNFGGAMFMNNDLNKDIGLEKKDVFDFGCLLFELINGKKFGQICEYLSNINVPLCEYNHVNLLEDDPSRFCDAVDEYLNKREFEDEVYTLLRVARECVHPLLEKRSTMFEVYNKIWNIWEKDRICENPDFSFIDSVTPTVSLISN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02358 357 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 23 334 - -
Tsu05g02358 357 Pfam Protein kinase domain 77 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02358 357 PANTHER RECEPTOR-LIKE PROTEIN 55 23 334 - -
Tsu05g02358 357 ProSiteProfiles Protein kinase domain profile. 75 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02358 357 SUPERFAMILY Protein kinase-like (PK-like) 59 328 IPR011009 -
Tsu05g02358 357 Gene3D Phosphorylase Kinase; domain 1 12 151 - -
Tsu05g02358 357 Gene3D Transferase(Phosphotransferase) domain 1 152 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02358 Tsu-Chr5 31280511 31283733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02358 48 333 Receptor kinase-like Gene Family AT1G69990 29.870 9.26e-37 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu05g02358 Pkinase 8.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02358 - - mtr:MTR_5g057660 457.218