Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02350 atggaaGATGTAATAACAGAAGCAGCACCACCATCAAGATTACTAGAAGAAGACCTAAACAATTTCACACAACCTTCTCCACCTCTTCCTTCACCTTTTCTCCTCTTCCCCCACACTCAACAAACCCTTAAACCTAACCTCCTCATCATCGCTATCTCTTcaccttctctctctcttttccaCAACTTCCTCACTCCTCAAACCCTAACCGCCTCACTCATCCTCCCTGAACTCCCTCTCTCTAATCCTAACAACCATACCCTCGACATCCACTCTCTCTCCTCAAACATTCTCATCGCCGCCGTTCGTAATCCTATTCCTGATACTCGCGCTTATTCCGTGGCTGAAATTCTCCTCAGTGATAAGATCCGTCCTGAATCGGTTATCATTCTTGATTCGATACAGCCGATGAATCACCGTGGTATGCTTTCGTCGGATGAGGCGGTTGCTTTTAAACTTGAGAGCGCTGTTGAAAGGAAGATGGTGAATGGAGAGAAGTTGTTGGATGGATTGGAGTATTATCCTTCTGGAAGTGTTGTTGATGGTGTTGGTGCTGCGATTCTTGGGAGATGTCAGATTTTGAAAATTAGGGCTGGTTTGTGTGTTTCTTGGCCTCAATTTGATTCAgatgttgtttttttgttaaaggATTTGCTTAAAGGTTTGAAGgagtttgattttggtttgagTGGTGATGAGGTTTTTAAATTTGGGAGGAGTAAGGATCATGTTTTTCAATCTCActtATTGTATGCTAGTGATCCTCAACTAACACTTGATTACTATGCATCAACTTGTCCTACTTTGTTTGATATTGTTAGGAAAGAAATGGAATGTTTAGTGCTTTCTGATCCTCGTAATGCGGCTTTGATTGTTCGGCTTCACTTCCACGACTGCTTTGTTCAGGGATGCGATGGATCGATCTTACTTGATGATACGTACACACTTAAAGGTGAGAAGAAAGCAGCTACCAACATCCACTCTTTAAAAGGCTTTGAAGTTATCGATAAAATCAAGAACTTCATTGAATCGGAGTGTCCTGGAATTGTTTCTTGTGCTGATATACTAACTATTGCAGCTAGAGATGCTGTGATTCTGGTTGGTGGACCATATTGGGATGTTCCTGTGGGAAGGAAGGATTCCGTGACTGCGAGTTTTGAACTTGCAAACACTAATCTTCCAACTCCTGATGAGAGCCTTGTCTCTATAATTCCCAAGTTTTTTTATCAAGGCCTATCAGTCACTGATATGGTAGCTCTTGTTGGATCCCACACCATTGGCATGGCAAGGTGTCAGAATTTTCGATCAAGAATATACGGAGACTACGAATCAACTTCCGTGAACAATCCAATCTCAGATAATCAGCTCAACAACTTGAAATCTATTTGTCCACCAATCGGGGGAGGAGACAATAACTTAACAGCAATGGACTACGTGACGCCTAATCTTTTTGACAATTCTTTCTACCAATTACTGTTAAAAGGCGAGGGAGTTCTCAACTCAGATCAAGAAATGTACTCGAGTGTGTTTGGAATTCAAACAAAAGAACTTGTCAAGAAGTATGCAATAGATTCTTTGGCTTTCTTTCAGCAATTCTCAGATTCAATGGTCAAAATGGGAAATATCACAAATTCAGAAAGCTTTGTTACTGGAGAAGTTAGGAAGAATTGCAGATTTGTgaacacataa 1689 0.3931 MEDVITEAAPPSRLLEEDLNNFTQPSPPLPSPFLLFPHTQQTLKPNLLIIAISSPSLSLFHNFLTPQTLTASLILPELPLSNPNNHTLDIHSLSSNILIAAVRNPIPDTRAYSVAEILLSDKIRPESVIILDSIQPMNHRGMLSSDEAVAFKLESAVERKMVNGEKLLDGLEYYPSGSVVDGVGAAILGRCQILKIRAGLCVSWPQFDSDVVFLLKDLLKGLKEFDFGLSGDEVFKFGRSKDHVFQSHLLYASDPQLTLDYYASTCPTLFDIVRKEMECLVLSDPRNAALIVRLHFHDCFVQGCDGSILLDDTYTLKGEKKAATNIHSLKGFEVIDKIKNFIESECPGIVSCADILTIAARDAVILVGGPYWDVPVGRKDSVTASFELANTNLPTPDESLVSIIPKFFYQGLSVTDMVALVGSHTIGMARCQNFRSRIYGDYESTSVNNPISDNQLNNLKSICPPIGGGDNNLTAMDYVTPNLFDNSFYQLLLKGEGVLNSDQEMYSSVFGIQTKELVKKYAIDSLAFFQQFSDSMVKMGNITNSESFVTGEVRKNCRFVNT 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02350 562 Gene3D - 261 561 - -
Tsu05g02350 562 ProSiteProfiles Plant heme peroxidase family profile. 256 561 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 Pfam Peroxidase 273 522 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 ProSitePatterns Peroxidases active site signature. 288 299 IPR019794 GO:0004601
Tsu05g02350 562 PRINTS Plant peroxidase signature 415 427 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 PRINTS Plant peroxidase signature 475 490 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 PRINTS Plant peroxidase signature 491 508 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 PRINTS Plant peroxidase signature 534 547 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 PRINTS Plant peroxidase signature 266 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 PRINTS Plant peroxidase signature 330 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 PRINTS Plant peroxidase signature 368 383 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 PRINTS Plant peroxidase signature 349 359 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 PRINTS Plant peroxidase signature 290 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 PANTHER PEROXIDASE 11 249 560 - -
Tsu05g02350 562 Gene3D Peroxidase, domain 2 394 539 - -
Tsu05g02350 562 PRINTS Haem peroxidase superfamily signature 477 492 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 PRINTS Haem peroxidase superfamily signature 368 380 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 PRINTS Haem peroxidase superfamily signature 416 431 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 PRINTS Haem peroxidase superfamily signature 350 367 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 PRINTS Haem peroxidase superfamily signature 288 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 SUPERFAMILY Heme-dependent peroxidases 256 561 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 CDD secretory_peroxidase 256 560 IPR033905 GO:0004601|GO:0042744
Tsu05g02350 562 PANTHER PEROXIDASE 72-RELATED 249 560 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g02350 562 ProSitePatterns Peroxidases proximal heme-ligand signature. 416 426 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02350 Tsu-Chr5 31091537 31096891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02350 252 562 Peroxidase AT1G68850 71.795 3.83e-172 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02350 K00430 - gmx:100780750 563.533