Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02339 ATGAACGAAGCTAATCCTTATTTCACTGCTCGATACTCAGTCAGACATTGTGCATACAAGCGGTCGCAGCAAGATCCCAATCCAGCTAATACGAAGATCATCGCCGCTTATTTGCTAGCTGTTTTGGGCGGTAACGCATCCCCTTCTGCTGCTGACATAAAAAACATCCTTGGTTCAGGAAAAAGTCGTCTTCGGTTCTTCAATGACTTCATTGCTTCAGAAACTTATGAAAAAACAACCATCCTCAAGACTCGTCACTGCTTTTCATCCTTTACACACACCAAACCCCATTGTTCCATTTAA 303 0.429 MNEANPYFTARYSVRHCAYKRSQQDPNPANTKIIAAYLLAVLGGNASPSAADIKNILGSGKSRLRFFNDFIASETYEKTTILKTRHCFSSFTHTKPHCSI 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02339 100 Gene3D - 31 64 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02339 Tsu-Chr5 30982189 30987205 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02339 32 59 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 75.000 1.70e-08 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02339 K02943 - pda:120112122 51.9878