Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02337 ATGGCAAACGATACTTCTAGTTCAGATTCCCATCATAAACGTCTTGGTCTTTTAAAAGATCAAGTTCATTTGGTTAAAAGGAAAGACTGTAATCGCTATGAAATTGCTTCAATACAAGATAATCTATCATTTGAGAAAGGGTTTTTTATAGTAATTCGCGCATGCCAATTGTTAGCCCAAAAGAATGATGGAATAATATTGGTTGGTGTGGCGGGTCCTTCAGGTGCAGGGAAGACTATATTTACTGAAAAGATACTCAATTTCATGCCAAGCATTGCTGTCATTTCAATGGATAATTACAATGATGCTAGTCGAATTGTTGATGGAAACTTTGATGATCCACGCTTAACTGACTATGATACATTGCTCCAGAATTTACATGATTTAAAGGAAGGAAAGACAGTCCAGGTTCCGATATATGATTTCAAGTCCAGTTCACGTATAGGATACAGGACTGTAGAATCCCCGAGTTCCCGTATTGTGATTATAGAGGGTATCTATGCCTTGAGTGAGAAGTTGCGAACTTTGCTGGACCTTCGAGTTTCTGTGACAGGTGGAGTTCACCTTGATCTTGTAAAGCGAGTGATACGTGACATACAACGTGCAGGCCAAGAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTATATCCTATGTACAAGGCTTTTATTGAGCCAGATCTTAAGACGGCACATATAAAAATCATTAACAAATTTAATCCATTTACTGGATTCCAGAGTCCTACTTACATTCTGAAGTCAGCAAGAAATGTAGCAGTTGATAAAATTAAAGCTGTTCTCTCTGATGATTTTAAGGAAACAACCGAGCAAACTTATGACATATATCTTCTACCTCCTGGTGAAGATCCAGAAACTTGCCAATCATATTTAAGGATGCGAAACAAGGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACAGATAATCCCTTTGTCATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTCCTTGGTGGACTAATGGCCTTGGGATATACGATAGCTACTATCCTCAAGAGAAACAGCCATGTCTTATCTGATGACAGGGTTTGTGTGAAACTAGATTGGCTTGAGCAACTTAATCGACATTATGTTCAGGTACAAGGGAGAGATCGCTTAATTTTGAAAGATATAGGAGATCAGTTGGGTCTCGAAGGTTCCTACATTCCTCGTACATACATTGAGCAAATTCAACTTGAAAGGCTTGTGAATGAGGTTATGGCCTTACCAGATGATCTGAAGACAAAGCTCAGCCTAGATGAGGATTTGGTTTCAAGCCCCAAAGAAGCGCTTTCTAGAGCCTCTGCTGACAGGGTTGCCATGAGAAATAAGAATATGACGAGAGGATTGTCACAGTCATATACAAATCAAAGGGACAAAAATGCAGTCAAAGTTAATGGATATTTTACCAACAATCGAAGGTTTGGTGAAAGTTCAGATTCTTCGACAACACAAGTAAATCAGGGAGCCATTAATCAGCTTTCAGAACAGATTTCTGCCCTCAATGATAGAATGGATGAATTTACAAATCGTATTGAAGAGCTGAATTGCAAGCTATCCATTAAGAATAATTCTCCAAGCCAACAAAATATGTCAGCTCAAGCAGAAGCCTGCAATGGTTCTGCTCCTACGTCTTACTTCATTAACAGTTTGGGCAATGGTAGCATAACTGGTTCTAAGATGCCTCATTCCTCGTCTTCATCACAATTAAATAAGGATTCTCCTTTAATAGATGAGATATCAGGCATTGCACGTGGCCAGCGTCAGATTATGCATCAAATGGACAATCTTAATAATCTTCTCCGGGGTAGCTTAGTGGAGAAGTCGCAGCAAACAAGAACCAACAAGAAAAACATAACTACAGATTCAAATTCCATTGCAGCTAGTGTTATAGTGGTAGTAGCAGTTGGTTGTTTGGGGATCTTCTTGATGAACGGTTTTTCGACCAGAAAGTGA 1989 0.3922 MANDTSSSDSHHKRLGLLKDQVHLVKRKDCNRYEIASIQDNLSFEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKTIFTEKILNFMPSIAVISMDNYNDASRIVDGNFDDPRLTDYDTLLQNLHDLKEGKTVQVPIYDFKSSSRIGYRTVESPSSRIVIIEGIYALSEKLRTLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLKTAHIKIINKFNPFTGFQSPTYILKSARNVAVDKIKAVLSDDFKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVLSDDRVCVKLDWLEQLNRHYVQVQGRDRLILKDIGDQLGLEGSYIPRTYIEQIQLERLVNEVMALPDDLKTKLSLDEDLVSSPKEALSRASADRVAMRNKNMTRGLSQSYTNQRDKNAVKVNGYFTNNRRFGESSDSSTTQVNQGAINQLSEQISALNDRMDEFTNRIEELNCKLSIKNNSPSQQNMSAQAEACNGSAPTSYFINSLGNGSITGSKMPHSSSSSQLNKDSPLIDEISGIARGQRQIMHQMDNLNNLLRGSLVEKSQQTRTNKKNITTDSNSIAASVIVVVAVGCLGIFLMNGFSTRK 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02337 662 Gene3D - 66 249 IPR027417 -
Tsu05g02337 662 Coils Coil 502 536 - -
Tsu05g02337 662 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Tsu05g02337 662 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Tsu05g02337 662 Gene3D - 254 412 - -
Tsu05g02337 662 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 5 653 - -
Tsu05g02337 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 236 IPR027417 -
Tsu05g02337 662 CDD UMPK_like 67 239 - -
Tsu05g02337 662 Pfam CYTH domain 268 404 IPR023577 -
Tsu05g02337 662 PANTHER URIDINE KINASE 5 653 - -
Tsu05g02337 662 SUPERFAMILY CYTH-like phosphatases 269 407 IPR033469 -
Tsu05g02337 662 PRINTS Uridine kinase signature 65 82 - -
Tsu05g02337 662 PRINTS Uridine kinase signature 188 198 - -
Tsu05g02337 662 PRINTS Uridine kinase signature 132 147 - -
Tsu05g02337 662 PRINTS Uridine kinase signature 224 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02337 Tsu-Chr5 30933941 30948338 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02337 66 236 PRT Gene Family AT5G40870 27.222 9.18e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02337 K00876 - gmx:100797542 1132.47