Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02322 ATGGAAAGGAAAGGAGATATAGCTTTGTTTTGTTTAGCTTTGTTCTTCATGTGTACTTCAGTAACTGGTTTACTTTCTTCTAAAGGTGTCAACTATGAAGTTCAAGCTTTGATTAGAATTAAGAATTCTTTAGTGGATCCTCATTCTGCTTTGAATAATTGGGATGCTACGTCTGTTGATCCTTGTAACTGGGCTATGGTCACTTGTTCTCCTGATCATGTTGTTGTTGCCCTTGGAATTCCAAGCCAAAATATATCTGGTACTCTCTCATCAAGCATAGGTTCTTTACCAAACCTTCAAACTGTGCTGCTGCAAGATAATAATATCACAGGACCAATACCTTATGAGATTGGAAAGCTTCAAAAGCTTCAAACTCTTGATCTTTCCGACAATTTCTTCACCGGTCAACTTCCGGATTCTCTTTCTCATATGAAGGGTCTTCATTATTTGCGGCTAAACAATAACAGTCTTTCCGGACCAATTCCTCCATCGGTAGCTAACATGACACAGCTTGTCTTTCTGGATCTTTCTTTTAATAACTTGAGTGGACCTGTACCTAAATTAAATGCTAAAACATTCAATATTGTAGGTAATCCCCAGATATGTGCAACTGAATTTGAACAAAACTGTTTTAGAACAACATTAATTTCTTCTGTTATGAATAATAACTCTCAAGATTTACAATCTTCTAATAGACCAAAAAGTCACAAAGCTGCCTTAGCTTTTGCTTCAAGCCTAAGCTGCATCTGTTTACTAATTCTGGGGTTTGGCTTCCTTCTTTGGTGGAGACAAAGATATAATAAGCAAATATTCTTCGACACGAATGAACAATACCGCGAAGATATTTGCCTTGGAAACCTAAAGAAGTTCCATTTCAGAGAACTTCAAGTTGCTACAAATAACTTCAGCAGCAAAAATTTAGTTGGAAAAGGTGGTTTTGGGAATGTTTACAAAGGTTGTCTCCGAGATGGTACAGTTATAGCAGTAAAAAGGCTCAAAGATGGTAATGCAGTTGGTGGCGAAATCCAATTCCAAACTGAACTAGAGATGATAAGCTTAGCTGTTCATAGGAATCTTCTTCGCCTGTATGGATTTTGCACGACAGCTACAGAGAGGCTCTTGGTTTATCCTTATATGTCAAATGGTAGTGTTGCTTCTCGTCTAAAAGGCAAGCCATCTCTAGATTGGGCTACAAGGAAGAGAATAGCATTAGGAGCAGGAAGAGGGTTACTATATTTACATGAACAATGTGATCCAAAGATTATTCATAGAGATGTAAAAGCAGCAAATATTTTGCTTGATGATTATTGTGAAGCTGTAGTAGGAGATTTTGGTTTAGCAAAACTATTGGACCACAGAGATTCACATGTGACAACAGCTGTTAGAGGAACTGTAGGACACATAGCTCCTGAGTACCTATCAACAGGACAATCTTCAGAGAAAACAGATGTATTTGGATTTGGAATTCTTCTACTTGAATTGATTTCTGGACAAAGAGCTCTTGAATTTGGTAAAGCTGTAAACCAGAAAGGAGCTATGCTTGATTGGGTAAAGAAAATACATCAAGAGAAGAAAATCGACGTGCTAGTCGACAAGGACCTGAGAAACAACTATGACAGGATAGAGCTAGATGAAATAGTTCAAGTGGCTCTTTTATGTACTCAGTACTTACCAAGTCACAGACCAAAAATGTCAGAAGTTGTTAGAATGCTTGAAGGAGATGGACTTGCAGAGAAATGGGAAGCTTCACAGAGAGCTGAATCAACAAGAAGTAGAGGAAATGAACTCTCGTCTTCAGAACGTTATTCTGATCTTACCGATGACTCATCATTGCTTGCACAAGCTATGGAACTTTCTGGACCAAGATAA 1869 0.3793 MERKGDIALFCLALFFMCTSVTGLLSSKGVNYEVQALIRIKNSLVDPHSALNNWDATSVDPCNWAMVTCSPDHVVVALGIPSQNISGTLSSSIGSLPNLQTVLLQDNNITGPIPYEIGKLQKLQTLDLSDNFFTGQLPDSLSHMKGLHYLRLNNNSLSGPIPPSVANMTQLVFLDLSFNNLSGPVPKLNAKTFNIVGNPQICATEFEQNCFRTTLISSVMNNNSQDLQSSNRPKSHKAALAFASSLSCICLLILGFGFLLWWRQRYNKQIFFDTNEQYREDICLGNLKKFHFRELQVATNNFSSKNLVGKGGFGNVYKGCLRDGTVIAVKRLKDGNAVGGEIQFQTELEMISLAVHRNLLRLYGFCTTATERLLVYPYMSNGSVASRLKGKPSLDWATRKRIALGAGRGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAVNQKGAMLDWVKKIHQEKKIDVLVDKDLRNNYDRIELDEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAESTRSRGNELSSSERYSDLTDDSSLLAQAMELSGPR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02322 622 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Tsu05g02322 622 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Tsu05g02322 622 SUPERFAMILY Protein kinase-like (PK-like) 282 572 IPR011009 -
Tsu05g02322 622 MobiDBLite consensus disorder prediction 589 613 - -
Tsu05g02322 622 Gene3D Ribonuclease Inhibitor 30 212 IPR032675 -
Tsu05g02322 622 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 7 622 - -
Tsu05g02322 622 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Tsu05g02322 622 SMART serkin_6 302 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02322 622 Gene3D Transferase(Phosphotransferase) domain 1 379 591 - -
Tsu05g02322 622 Pfam Protein kinase domain 303 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02322 622 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 622 - -
Tsu05g02322 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Tsu05g02322 622 SUPERFAMILY L domain-like 32 195 - -
Tsu05g02322 622 MobiDBLite consensus disorder prediction 579 622 - -
Tsu05g02322 622 ProSiteProfiles Protein kinase domain profile. 302 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02322 622 Gene3D Phosphorylase Kinase; domain 1 271 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02322 Tsu-Chr5 30733950 30739231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02322 8 622 Receptor kinase-like Gene Family AT5G16000 71.360 0.0 914
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Tsu05g02322 Pkinase 2.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02322 - - gmx:100790194 1095.11