Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02319 ATGATTCTCGCAACGATTAGTTCTTGCGATTTCGATTCAAGCTTCACTGAAACAAGCTTCTCGCAACCATTAGGAAGTTTTCTTCAAGCTTCACTCACCGATACGATGATTCGTTGGCGAAGAATGTCTGGATACAATACTTTGTGGGTTCCTGGGATGGATCACGCTGGAATTGCTACACAGAACAAAGGATCATGGGTTGCTTTGGTTTCTGCAAAGAGAATGATTCTTACACAACTGCTGATAAAGGAATCTTCATGCAAAACAATCCTGCAGGTCTCCATCGTATCAAGGCTAAAGCATGAAAATGTTGTCGAGCTTGTTACTTATTGTGTTGATGGTCCATTGCGTGCCCTTGCGTATGAGTATGCTCCTAATGGATCCCTTCATGATATTCTACATGGACGCAAAGCTAGAGGACTTGAATATCTTCATGAAAAGGCAGAGGTTCATATTGTCCATCGTTACATTAAATCTAGTAACATTCTTCTATTCGAGGACGATGTTGCAAAAATTGCTGATTTTGATCTGTCGAATCAAGCCCCTGATGCAGCAGCACGTCTTCATTCTACCCGTGTTCTTGGAACTTTTGGTTATTATGCTCCAGAGTAG 612 0.4167 MILATISSCDFDSSFTETSFSQPLGSFLQASLTDTMIRWRRMSGYNTLWVPGMDHAGIATQNKGSWVALVSAKRMILTQLLIKESSCKTILQVSIVSRLKHENVVELVTYCVDGPLRALAYEYAPNGSLHDILHGRKARGLEYLHEKAEVHIVHRYIKSSNILLFEDDVAKIADFDLSNQAPDAAARLHSTRVLGTFGYYAPE 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02319 203 Pfam tRNA synthetases class I (I, L, M and V) 24 63 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Tsu05g02319 203 Pfam Protein kinase domain 88 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02319 203 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 84 203 - -
Tsu05g02319 203 Gene3D Transferase(Phosphotransferase) domain 1 92 203 - -
Tsu05g02319 203 SMART tyrkin_6 75 203 IPR020635 GO:0004713|GO:0006468
Tsu05g02319 203 Gene3D HUPs 17 91 IPR014729 -
Tsu05g02319 203 ProSiteProfiles Protein kinase domain profile. 45 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02319 203 SUPERFAMILY Nucleotidylyl transferase 24 65 - -
Tsu05g02319 203 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 84 203 - -
Tsu05g02319 203 SUPERFAMILY Protein kinase-like (PK-like) 73 203 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02319 Tsu-Chr5 30596366 30599676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02319 83 203 Receptor kinase-like Gene Family AT5G56890 41.429 4.81e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Tsu05g02319 Pkinase 1.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02319 K13436 - gmx:547595 204.912