Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02306 atggttTCAAAAACTAGAATTACTATCATTAATGTTGCTATCATAGTAATATTATTCACAGCAAATGTTGTATTATCAGATGACACAATTCCAATTCCAGCTGATAGAGCCCAATTAGATAAATGGTTCAACACCAATGTTGGTccatttgaaaaaagaaaagctaCACTTGACCATGCATTGGTGACTGCAGAAGCTCATGCCGAAGTTATTAAAGTAATGCAAGATGGTAGTGGGGAATTCAAAACCATCACCGATGCTATTAATAGTATACCTAGTGGTAACACAAAACGTGTGATTATTCACATTGGTGCTGGAAATTATCACgagaaaatcaaaattgagaGCACAAAACCTTTTGTTACATTGTATGGAACACCAGAAAGTATGCCAAATATAACATATGGTGGTACTGCAAAACAATATGGAACAATTGAGAGTGCTACATTGATTGTTGAAGGAGATTATTTTGTAGCTGCTAATGTCATAATATCGAATTCTGCACCAAGACCTGATGGAAAAACGGGAGGTGCTCAAGCGGTTGCATTGAGAGCTTCTGGTGACAAATCAACATTTTATAATTGTCAATTCTTTGGATTCCAGGACACAATTTGTGATGATAGGCATAATCATTTTTTCAAGGATTGTTTAATTCAAGGCACAGTGGATTACATATTTGGAAGTGGTAGGTCACTGTATTTGAAAAATGAATTGAGATCACTTGGTGCCACCGGGCCAACAGTGATAGTGGCACAAGCAAAACACAGTGAAACAGATGATACTTTATACTCATTTGTCCATTGTGATATCACTGGAACTGGACATGACACTTTCTTAGCCAGATCATGGTTAGGTCAATCCAAAGTTGTGTTTGCTTACTCAACTATGACTGATGTTCTTAATCCAAAAGCTTGGAATAATGACTTGCACCCTGAATATGAAAAAACTGTATACTTTGGAGAATACAAGAACACAGGACCAGGTGCAAATACTAAAGGGCGTGCCCCTTTCACAAAGCAACTGACTGAAGCAGAGGTTAAACCTTTTATTACCCTTGGAATGATTCAAGCATCTAAATGGCTTCTTCCTCCTCCAAAAATCTAA 1104 0.3587 MVSKTRITIINVAIIVILFTANVVLSDDTIPIPADRAQLDKWFNTNVGPFEKRKATLDHALVTAEAHAEVIKVMQDGSGEFKTITDAINSIPSGNTKRVIIHIGAGNYHEKIKIESTKPFVTLYGTPESMPNITYGGTAKQYGTIESATLIVEGDYFVAANVIISNSAPRPDGKTGGAQAVALRASGDKSTFYNCQFFGFQDTICDDRHNHFFKDCLIQGTVDYIFGSGRSLYLKNELRSLGATGPTVIVAQAKHSETDDTLYSFVHCDITGTGHDTFLARSWLGQSKVVFAYSTMTDVLNPKAWNNDLHPEYEKTVYFGEYKNTGPGANTKGRAPFTKQLTEAEVKPFITLGMIQASKWLLPPPKI 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02306 367 Pfam Pectinesterase 71 354 IPR000070 GO:0030599|GO:0042545
Tsu05g02306 367 Gene3D - 65 363 IPR012334 -
Tsu05g02306 367 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 362 - -
Tsu05g02306 367 SUPERFAMILY Pectin lyase-like 66 361 IPR011050 -
Tsu05g02306 367 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Tsu05g02306 367 PANTHER PECTINESTERASE 63-RELATED 36 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02306 Tsu-Chr5 30304528 30307237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02306 11 367 Carbohydrate Esterase AT1G69940 52.778 7.22e-143 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02306 K01051 - gmx:100813174 550.821