Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02257 ATGGAAAACTACAGAGATGTTGATGTTCATTCAACTGAAACCGATTCATCTGATGCATCTTCAGAATTTGATGAATATAATAGTAGTGAAAATAGTGACGATGAAGATGGTAATTATATTGTATCGGCTGCAGATCAAAGttcagatgatgaagatgttGCTCATAATGACGATGATGAGGATGCTTTTGAAGTGGGTGTGTCAACAAACCAAGCAACTACATGTGATAAATTCTTAAGGATTGATTCAATGAATGCTGAGGAAATTAGTGCTCTAGAATTTGTAAGTGAGGTTGAAGCTTATGAATTTTATTACCAATATGGAAGACGTAAAGGTTTTGCCGTTCGGAGAAGCTCTACTAAGCGTAAAGGGCCCAACGGTAGTCGAATCATAGTAATGAGGGAGTTCGTATGCAACATGCAAGGGTTAAGAAACAAGAGGCACTTGACTATGGTGGATAGGCTAAGAGATCACCGTCGGGTTAGTCGTACTAAATGCACAGCTAGGCTCCGTGTGATCTACAGAGCCAAAGAAATCAAATATGTAGTGACAATATTTAATGAGACTCATAACCATGAATTAACTCCAGCTAAGTATGTCCATTTACACCCTGTTTATTGTAACATTTCTGAATCAGATAAAGCTCAAATTAATGTTCTTCAGACACATGGGATCAGAACTTGTCATATAATGGTTGCTCAAAAGGGAGGATATACTGATGTTGGTTTTACAAAACAAGATTTGTACAATTATTTCGATAAAAGATGCGTGCTATTGTTAAAGATGGTGATGTTTCTACTACTTTAA 807 0.3594 MENYRDVDVHSTETDSSDASSEFDEYNSSENSDDEDGNYIVSAADQSSDDEDVAHNDDDEDAFEVGVSTNQATTCDKFLRIDSMNAEEISALEFVSEVEAYEFYYQYGRRKGFAVRRSSTKRKGPNGSRIIVMREFVCNMQGLRNKRHLTMVDRLRDHRRVSRTKCTARLRVIYRAKEIKYVVTIFNETHNHELTPAKYVHLHPVYCNISESDKAQINVLQTHGIRTCHIMVAQKGGYTDVGFTKQDLYNYFDKRCVLLLKMVMFLLL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02257 268 Pfam FAR1 DNA-binding domain 102 195 IPR004330 -
Tsu05g02257 268 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 31 213 - -
Tsu05g02257 268 MobiDBLite consensus disorder prediction 1 57 - -
Tsu05g02257 268 MobiDBLite consensus disorder prediction 1 17 - -
Tsu05g02257 268 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 31 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02257 Tsu-Chr5 29371644 29372450 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu05g02257 FAR1 7.1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02257 - - ccaj:109792835 211.46