Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02255 ATGCAAAGCTTCAAAACAGCTCAATCAAACTCTCAACTCTATTGTCACCAACCCTTCTTACTTCGGGGAGAAGATATAAACAGAAACCAAATGCGTTTTTCTGATCTTGGAGAGTTTCATCATTCTTCTCCTTTCTTTCAACAACATGATGCTGTTGATTTAAGTTCAAGTTGTATGTTTAGTAGTGTAAAGTCGAACAATGTTGTTATTGGTGGTAGTAACATGCAGTATGGAACAACAATCAACACGAATGTTGGGTCTGTAGAGATAGCTTCAAATGGCGCAGGGTGTTCGGATGCAGGGCAGCAGCAACTGATGTACAACAAGGGAATAGCCTCCTTGCCTTTGGGGAATTGTCATGTTGAAAATTGGGCTGATTCTGGAATGGCAGATAATAGCCAACAGACTGATGATACTTCCACTGATATTGATACTGATGATAAAAACCAATCCAACAGAGGAAAGAGTGAGGCGCTTATGGTTGCTCACTCCAAGGATCAGACCAAGTTCAGAGCTGAAGATCACAAGACCCTTCGTAGACTTGCTCAGAATCGTGAGGCGGCAAGGAAGAGTCGGTTACGGAAGAAGGCATATGTAGAGCAGCTGGAGAGCAGCCGAGTCAAGCTTATGCAATTAGAGCAAGAGCTTCAACGAGCACGTCAACAGGGCATGTATCTTGCAAATCCTGGAGATCAAGGTCATTCAGCTGTTGGAAATGGTGCCATGGCATTTGACATGGACTATGCTCACTGGGTTGATGAGCATCAACATCTTCTCAACGATCTAAGATCGGCGTTAAATTCTCAAATGGGTGATAATGAATTGCATCTTCTTGTTGATGGTGTTATGGCACATTATGATGAATTATTTAGGTTAAAGAGCATAGGGGCAAAGGCGGATATATTTCACATGCTTTATGGGCAGTGGAAGACACCGGTAGaaagattttttatttggcATGGTGCATTCCGTTCATCTGAACTTCTCGAGATAGTCAGGAACCACCTCGAGCCATTAACCGAAAATCAGTTGATGGGAATTTGTACTTTGCAGAAGTCTACTCAGCAGACTGAGGATGCTTTATCTCAAGGAATGGAAGCATTGAAACAATCTCTTTTAGAGACACTTTCCTCTACCTCTTCAGCACCTAGTACTGGTTCTGGAAATGTAGCTGATTACATGGGCCAGATGGCATTTGCGATGAGCAAGCTTGCATCAATAGAGGAATTCCTTCGTCAGGCTGACCTCTTGAAGCAAAAAACTCTGCAACAGTTACAAAGGATTTTGACGACACGTCAGATTGCTCGGGCACTCCTTGTCAGAAATGATTACATTTCAAGACTACGAGCACTTAGCTCGTTATGGTTAGCACGACCAAGGGATTAG 1386 0.4264 MQSFKTAQSNSQLYCHQPFLLRGEDINRNQMRFSDLGEFHHSSPFFQQHDAVDLSSSCMFSSVKSNNVVIGGSNMQYGTTINTNVGSVEIASNGAGCSDAGQQQLMYNKGIASLPLGNCHVENWADSGMADNSQQTDDTSTDIDTDDKNQSNRGKSEALMVAHSKDQTKFRAEDHKTLRRLAQNREAARKSRLRKKAYVEQLESSRVKLMQLEQELQRARQQGMYLANPGDQGHSAVGNGAMAFDMDYAHWVDEHQHLLNDLRSALNSQMGDNELHLLVDGVMAHYDELFRLKSIGAKADIFHMLYGQWKTPVERFFIWHGAFRSSELLEIVRNHLEPLTENQLMGICTLQKSTQQTEDALSQGMEALKQSLLETLSSTSSAPSTGSGNVADYMGQMAFAMSKLASIEEFLRQADLLKQKTLQQLQRILTTRQIARALLVRNDYISRLRALSSLWLARPRD 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02255 461 PANTHER TRANSCRIPTION FACTOR TGA9 38 461 - -
Tsu05g02255 461 MobiDBLite consensus disorder prediction 125 161 - -
Tsu05g02255 461 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 179 194 IPR004827 GO:0003700|GO:0006355
Tsu05g02255 461 Gene3D - 175 228 - -
Tsu05g02255 461 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 174 218 IPR004827 GO:0003700|GO:0006355
Tsu05g02255 461 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 38 461 - -
Tsu05g02255 461 ProSiteProfiles DOG1 domain profile. 241 458 IPR025422 GO:0006351|GO:0043565
Tsu05g02255 461 Pfam bZIP transcription factor 175 211 IPR004827 GO:0003700|GO:0006355
Tsu05g02255 461 CDD bZIP_HBP1b-like 176 227 - -
Tsu05g02255 461 MobiDBLite consensus disorder prediction 141 161 - -
Tsu05g02255 461 SMART brlzneu 172 232 IPR004827 GO:0003700|GO:0006355
Tsu05g02255 461 Coils Coil 195 222 - -
Tsu05g02255 461 Pfam Seed dormancy control 259 333 IPR025422 GO:0006351|GO:0043565
Tsu05g02255 461 SUPERFAMILY Leucine zipper domain 176 219 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02255 Tsu-Chr5 29340268 29345330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02255 3 461 bZIP Transcription Factor Family AT1G68640 54.334 1.63e-153 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu05g02255 DOG1 1.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02255 K14431 - gmx:100797393 614.764